Gene Information

Name : RORB6_11160 (RORB6_11160)
Accession : YP_007874468.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2439551 - 2440222 bp
Length : 672 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAATCTTAGTCATTGAAGACGACGCACTCCTGTTACAAGGCCTGATCCTGGCAATGCAAAGCGAGGGATACGTCTG
TGATGGCGTCGCCACTGCTCACGAGGCCGCCCTGTCCCTCGCCAGCAACCATTACAGCCTGATCGTACTCGATCTCGGCC
TGCCGGATGAAGATGGCCTGCACTTCCTGATGCGCATGCGTCGGGAAAAATTCAGCCAGCCGGTGCTGATCCTGACCGCC
CGCGATACCGTTGAAGATCGCATCAGCGGTCTCGACACCGGCGCAGATGACTATCTGGTGAAACCTTTCGCCCTGGAAGA
GCTGAACGCCCGCATCCGCGCGCTGCTCCGCCGCCATAATAACCAGGGCGACAACGAAATGGCCGTGGGCAACCTGCGGC
TGAACATGACTCGTCGCCTGGTGTGGCTGGGCGGCGAGGCGCTGGACCTGACGCCGAAAGAGTACGCCCTGCTCTCTCGC
CTGATGATGAAAGCGGGCAGCCCGGTACACCGTGAAATTCTCTACAACGATATCTACAGCTGGGACAATGAACCCGCCAC
CAATACGCTGGAGGTTCATATCCATAACCTGCGCGAAAAAGTGGGTAAAGCCCGTATTCGTACCGTCAGGGGGTTTGGCT
ATATGCTGGTGAACAATTCAGGAACGGAATAA

Protein sequence : 
MKILVIEDDALLLQGLILAMQSEGYVCDGVATAHEAALSLASNHYSLIVLDLGLPDEDGLHFLMRMRREKFSQPVLILTA
RDTVEDRISGLDTGADDYLVKPFALEELNARIRALLRRHNNQGDNEMAVGNLRLNMTRRLVWLGGEALDLTPKEYALLSR
LMMKAGSPVHREILYNDIYSWDNEPATNTLEVHIHNLREKVGKARIRTVRGFGYMLVNNSGTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-39 44
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_11160 YP_007874468.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 2e-61 58
RORB6_11160 YP_007874468.1 DNA-binding transcriptional regulator BasR HE999704.1.gene1528. Protein 3e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_11160 YP_007874468.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 4e-85 78
RORB6_11160 YP_007874468.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 5e-30 41