Gene Information

Name : RORB6_09115 (RORB6_09115)
Accession : YP_007874064.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : Aerobactin siderophore receptor IutA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2015177 - 2017363 bp
Length : 2187 bp
Strand : +
Note : COG1629 Outer membrane receptor proteins, mostly Fe transport

DNA sequence :
ATGAACAAGCGTCTCTGGGTGCTTAACCCACTGCTGCTGGCCACCGCCCTGCCCGCCTTTGTCGCGCAGGCGGATGAAGA
AAACATTATCGTTAGCGCCAACCGAACTCACCGCACCGTCGCCGAAATGGCGCAAACCACGTGGGTTATCGAAGGTCAGG
AGATAGAACAACAGGTTCAGGGTGGAAAGGAGTTCAAAGACGTCCTGGCCCAGTTGATTCCCGGCATTGATGTCAGCAGC
CAGGGACGAACCAACTACGGAATGAACATGCGTGGACGGGCCATCGTGGTGCTGATCGACGGCGTTCGCCTCAACTCTTC
CCGTACCGACAGCCGTCAGCTCGACGCCATCGACCCGTTCAACATTGAGCATATTGAAGTCATCTCCGGCGCCACTTCGC
TGTATGGCGGCGGCAGTACCGGCGGCCTGATCAATATCGTGACCAAAAAAGGGCAGCAGGAACGCCAGGTGGATCTGGAA
TTAGGTGGCAAAAGCGGGTTTGCCAACAGCAACGATCACGACGAACGCGTAGCGGCGGCGGTCAGCGGCGGCACCGACCA
TGCCTCCGGCCGGTTATCGGTGGCTTATCAGCGTTTTGGCGGCTGGTATGATGGCAATAACGATGCGCTGGTCCTCGATA
ATACGCAGACCGGCCTGCAGCACTCGGATCGTCTGGATGTCATGGGCACCGGCACCATCAACATTGACGATAACCGTCAG
CTGCAGCTGGTAACGCAATACTATAAAAGCCAGGGCGATGATTACGGCCTGTATCTCGGCAAAAACATGTCGGCCGTCAC
CGGCGAGGGTAAAGCCTATACCACCGACGGACTCAATTCCGACCGCGTTCCTGGCACCGAACGGCATCTGATTAGCCTGC
AATACTCCGATGCAGATTTCTACGGCCAGAATCTGGTCAGCCAGATCTATTATCGCGACGAGTCGCTGACCTTTTACCCC
TTCCCGACGCTCACCAAAGGTCAGGTCAGCAGCTTCTCCTCATCTAAACAGGATACCGATCAGTACGGTGCGAAGATTAC
CCTCAACAGCCAACCGCTCGACGGCTGGGATCTGACCTGGGGGCTGGATGCCGATCATGAGACCTTTAATGCCAACCAGA
TGTTCTTCGATCTGAACACCTCGATGGCATCAGGCGGCCTGCACAACGAGTCTATCTATACAACAGGACGTTATCCGGGC
TATAGCATTACAAACCTGGCGCCGTTCCTGCAGAGTAGTTATGACCTGAATGATATTTTCACCCTGAGCGGCGGCGTGCG
CTATCAGTGGACGGAAAACCGGGTTGATGATTTTGTCGGCTACGCCCAGCAGCAGGATGTCGCCAGCGGCAAGGTGAACT
CGGCCGATGCCATCCCGGGTGGTAAAACGGATTATGATAACTTCCTGTTTAACGCCGGTATTGTCGCCCACCTCACCGAC
CGCCAGCAGACCTGGTTTAACTTCTCGCAGGGCGTCGAGCTGCCGGACCCGGGTAAATACTATGGTATCGGCAAATACGG
CGCGGCGGTCAACGGCAACTATCCCCTGCTGTCGAGTGTCAACGTGGGTGATTCGCCGCTGCAGGGGATCAAAGTCAACT
CCTACGAACTGGGCTGGCGTTACACCGGCGATAATCTGCGTACCCAGCTGGCGGCATACTACTCCACCTCGGACAAAACC
ATTGTTGTTAACCGTACCGATATGACGATCGACGTACAATCCGACAAGCGGCGTATTTACGGTGTGGAAGGGGCCGTCGA
TTACTTCTTCCCGGATAGCGACTGGAGCACAGGTGCAAACTTCAACGTGTTGAAATCCCAGGTGAAGAGTGACGGTAGCT
GGCAGAAATGGGATGTGACTCTCGCTTCGCCTTCCAAAGCCACCGCCTGGGTCGGCTGGGCGCCGGATCCGTGGTCGCTG
CGCGTGCAGACTCAGCAGGTATTCGACCTGAGCGATGCCAGCGGTAATAAGCTCGACGGCTACAATACCGTAGACTTTAT
CGGCAGCTATGCGCTCCCGGTTGGCAAACTGACCTTCAGCATCGAGAACCTGCTGAACGAAGACTATGTCACCATCTGGG
GACAACGCGCCCCGCTGCTCTACAGCCCGACCTACGGCAGCAGTTCACTGTATGAATACAAAGGTCGCGGGCGTACCTTT
GGCCTGAACTACGCCGTCAGCTTCTGA

Protein sequence :
MNKRLWVLNPLLLATALPAFVAQADEENIIVSANRTHRTVAEMAQTTWVIEGQEIEQQVQGGKEFKDVLAQLIPGIDVSS
QGRTNYGMNMRGRAIVVLIDGVRLNSSRTDSRQLDAIDPFNIEHIEVISGATSLYGGGSTGGLINIVTKKGQQERQVDLE
LGGKSGFANSNDHDERVAAAVSGGTDHASGRLSVAYQRFGGWYDGNNDALVLDNTQTGLQHSDRLDVMGTGTINIDDNRQ
LQLVTQYYKSQGDDYGLYLGKNMSAVTGEGKAYTTDGLNSDRVPGTERHLISLQYSDADFYGQNLVSQIYYRDESLTFYP
FPTLTKGQVSSFSSSKQDTDQYGAKITLNSQPLDGWDLTWGLDADHETFNANQMFFDLNTSMASGGLHNESIYTTGRYPG
YSITNLAPFLQSSYDLNDIFTLSGGVRYQWTENRVDDFVGYAQQQDVASGKVNSADAIPGGKTDYDNFLFNAGIVAHLTD
RQQTWFNFSQGVELPDPGKYYGIGKYGAAVNGNYPLLSSVNVGDSPLQGIKVNSYELGWRYTGDNLRTQLAAYYSTSDKT
IVVNRTDMTIDVQSDKRRIYGVEGAVDYFFPDSDWSTGANFNVLKSQVKSDGSWQKWDVTLASPSKATAWVGWAPDPWSL
RVQTQQVFDLSDASGNKLDGYNTVDFIGSYALPVGKLTFSIENLLNEDYVTIWGQRAPLLYSPTYGSSSLYEYKGRGRTF
GLNYAVSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 74
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 74
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 74
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 73
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_09115 YP_007874064.1 Aerobactin siderophore receptor IutA VFG0619 Protein 0.0 74
RORB6_09115 YP_007874064.1 Aerobactin siderophore receptor IutA VFG0936 Protein 0.0 74
RORB6_09115 YP_007874064.1 Aerobactin siderophore receptor IutA VFG1085 Protein 0.0 73