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Name : RORB6_08625 (RORB6_08625) Accession : YP_007873966.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 1908462 - 1910414 bp Length : 1953 bp Strand : - Note : COG0550 Topoisomerase IA DNA sequence : ATGCGGTTGTTTATTGCGGAAAAACCCAGTCTCGGTCGCGCAATCGCCGACGTGCTCCCCAAACCGCATCGCAAAGGTGA TGGCTACATTGAGTGCGGTAACGGGCAGGTGGTCACCTGGTGTATCGGCCATCTGCTCGAGCAGGCTCAGCCGGACGTCT ATGACGGGCGCTATGCGCGCTGGAATCTGCTCGACCTGCCTATTGTGCCGGAGAAGTGGCAGCTGCAGCCCAAACCGTCG GTCACCAAACAGCTCAACGTCATCAAGCGTCTGCTGGGCGATGCGCAGGAGGTGATTCACGCCGGTGACCCGGACAGAGA GGGGCAGCTGCTGGTAGACGAGGTTCTCGACTATCTGCAGCTGGCGCCAGAAAAGCGCCAGCAGGTTCAGCGCTGCCTGA TTAACGATCTCAACCCGCAGGCGGTGGAGCGGGCGATTGCTCGTCTGCGCGCCAACAGCGAGTTTATTCCGCTGTGCGTT TCGGCCCTGGCCCGCGCCCGCGCCGACTGGCTGTACGGGATTAACATGACCCGCGCCTATACGCTGCTCGGCCGCAATGC CGGCTACCAGGGGGTGCTGTCGGTCGGGCGGGTGCAGACGCCGGTGCTGGGGCTGGTCGTGCGGCGTGATGAAGAGATTG AGAATTTCGTCGCCAAAGATTTCTTTGACGTCAAGGCGCATATCGTGACGCCGAAGGATGAGCGTTTCGTTGCCACCTGG GTGCCGAGCGATGCCTGCGAACCGTATCAGGATGAAGAGGGGCGTCTGCTGCATCGTCCGCTGGCCGAACACGTGGTGGC GCGCATTGAGGGCCAGCCGGCGCGGGTGACCGCCTACAACGATAAGCGGGATTCTGAGCCGGCGCCGCTGCCGTTTTCGC TTTCGACGCTGCAGATTGAGGCGGCGAAGCGCTTTGGCTTTAGCGCGCAAAACGTGCTGGATATCTGCCAGAAACTGTAT GAAACCCACAAACTGATTACCTATCCGCGTTCGGACAGCCGCTATCTGCCGGAGGAGCATTTTGCCGGTCGGCATGCGGT TCTTAATGCCATCGCGGTTCATGCGGCGGATCTGCTGCCGCAGCCGGCGGTTGATCCGGAAATCCGCAACCGCTGCTGGG ACGATAAAAAAGTGGATGCGCACCATGCGATCATCCCGACCGCCCGCAGCAGCCAGGTGAAACTGTCCGATAACGAAGAG AAGGTGTATGGCCTGATTGCCCGCCAGTATCTGATGCAGTTCTGCCCGGATGCGGTCTTCCGCAAGTGTCAGATCGATCT TGATATTGCCAATGGCAAATTTGTCGCCAAAGCGCGTTTCCTCGCCGAAGCCGGCTGGCGCGCGCTGCTGGGTAACAAAG AGCGGGATGAAGAGAACGACGGTACCCCGCTGCCGGTGGTGGCCAAAGACGACGAGCTGTTGTGTGAAAAGGGCGAAGTG GTGGAGCGGCAAACTCAGCCGCCGCGCTATTTTACCGATGCAACGCTGCTGTCGGCGATGACCGGGATTGCTCGTTTTGT GCAGGATAAAGAACTGAAAAAAATTCTGCGTGCGACCGACGGTCTGGGTACGGAGGCGACCCGCGCCGGGATCATCGAAC TGCTGTTTAAGCGGGGCTTTTTAGTTAAAAAGGGGCGCTATATTCACTCCACCGATGCCGGACGTGCGCTGATTCACTCC CTGCCGGAGATGGCTGCCCGGCCGGATATGACCGCTCACTGGGAGTCGGTACTGACGCAAATTAGCGAGAAGCAGTGCCG TTATCAGGACTTTATGCAGCCGCTGGTCGCCACGCTTTATCAGCTGATTGAGCAGGCCAGGAGTACGCCGGTGCGTCAGT TCCGCGGCATTGTCGCGCCGGGAGGCGCTAAAAAGAGTTTCAGCAAAGGTAAAACCAAAGCTAAAACGAAAGACAAGAAG CCCGCTGCGGACTCCGCCGCGGAAAATCCATAA Protein sequence : MRLFIAEKPSLGRAIADVLPKPHRKGDGYIECGNGQVVTWCIGHLLEQAQPDVYDGRYARWNLLDLPIVPEKWQLQPKPS VTKQLNVIKRLLGDAQEVIHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIARLRANSEFIPLCV SALARARADWLYGINMTRAYTLLGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFDVKAHIVTPKDERFVATW VPSDACEPYQDEEGRLLHRPLAEHVVARIEGQPARVTAYNDKRDSEPAPLPFSLSTLQIEAAKRFGFSAQNVLDICQKLY ETHKLITYPRSDSRYLPEEHFAGRHAVLNAIAVHAADLLPQPAVDPEIRNRCWDDKKVDAHHAIIPTARSSQVKLSDNEE KVYGLIARQYLMQFCPDAVFRKCQIDLDIANGKFVAKARFLAEAGWRALLGNKERDEENDGTPLPVVAKDDELLCEKGEV VERQTQPPRYFTDATLLSAMTGIARFVQDKELKKILRATDGLGTEATRAGIIELLFKRGFLVKKGRYIHSTDAGRALIHS LPEMAARPDMTAHWESVLTQISEKQCRYQDFMQPLVATLYQLIEQARSTPVRQFRGIVAPGGAKKSFSKGKTKAKTKDKK PAADSAAENP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 3e-106 | 42 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-110 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-110 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-110 | 41 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 2e-102 | 41 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 1e-107 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 3e-110 | 41 |
