|
Name : RORB6_08025 (RORB6_08025) Accession : YP_007873846.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Unknown Product : nucleotidyltransferase/DNA polymerase involved in DNA repair Function : - COG functional category : - COG ID : - EC number : - Position : 1784007 - 1785272 bp Length : 1266 bp Strand : - Note : COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA sequence : ATGTTTGCGCTATGCGATGTGAATTCGTTTTATGCCTCGTGTGAAACCGTTTTTCGCCCGGACCTGAAGGGGCGGCCCGT GGTGGTGTTATCCAATAACGACGGATGCGTTATTGCGCGTTCTGCCGAAGCGCAATCGCTGGTGAAAACCGGTGAACCGT ACTTCAAACTGAAGGATCTCTTCAGGCGTCACCGGGTGGTTTGCTTCAGTAGCAACTATGAACTCTATGCGGATATGTCC AATCGGGTGATGACCACGATCGAGGAGATGTCTCCCCGCTGCGAAATATACTCTATTGATGAGATTTTTTGTGACTTCAC CGGCGTGCGCAACTGTCGCGATCTGACGGAGTTTGGGCGCGAAATCAGAGCCACGGTTTTGCAACGTACGCATCTGACGG TTGGGGTGGGGATCGCTCAGACCAAAACCCTGGCCAAACTGGCGAACTATGCGGCCAAAAAATGGCAACGGCAGACCGGA GGGGTGGTCGATCTGTCAAATATTGCGCGTCAGCGGAGGCTCATGGCGGCATTAAATGTCGGTGACGTCTGGGGCGTAGG TCGGCGGATTGCGAAAAAACTGGAAGGGCTGGGCATCAGGACCGTCCTGCAGCTGGCAGACACCGATATTCGGTTTATCA GAAAGCATTTCAACGTTGTGCTGGAGAGAACCGTGCGTGAACTCCGCGGCGAGCCATGTCTTGAACTGGAAGAATTTGCT CCTATCAAACAGGAGATTATCTGCTCCCGGTCCTTCAGCCACTACATCGTGGAATATGAGGAGATGCGGCAGGCTATTTG CAGCTATGCCACACGGGCTGCGGAGAAACTGCGTAGCGAGCATCAATATTGCCGCTTTATCTCCGCGTTTGTTAAAACCT CGCCATTTGCGCACAACGAGCCGTATTACAGCAACAGCGCATCGGTAAAGCTGCTGACCCCCACCCAGGACAGCCGGGAT ATTATCGGCGCGGCGATGCGCTGCCTGGATGCCATCTGGAAAGATGGTCAGCGGTATCAGAAAGGGGGGGTTATGCTGGG TGACTTTTATAGTCAGGGGGTGGCGCAGCTTAACCTGTTCGATGAAAATGCGCCGCGACACAACAGCCAGAAGCTGATGG AGGTGTTGGATCGTCTGAATGCGAAAGAGGGGCGCGAAACGCTTTATTTCGCCGGACAGGGTATCCAGCCGCAGTGGCGG ATGAAACGGGAAATGCTTTCGCCGAGATATACCACGCGCTATGCCGACCTGCTCACGGTTAAGTGA Protein sequence : MFALCDVNSFYASCETVFRPDLKGRPVVVLSNNDGCVIARSAEAQSLVKTGEPYFKLKDLFRRHRVVCFSSNYELYADMS NRVMTTIEEMSPRCEIYSIDEIFCDFTGVRNCRDLTEFGREIRATVLQRTHLTVGVGIAQTKTLAKLANYAAKKWQRQTG GVVDLSNIARQRRLMAALNVGDVWGVGRRIAKKLEGLGIRTVLQLADTDIRFIRKHFNVVLERTVRELRGEPCLELEEFA PIKQEIICSRSFSHYIVEYEEMRQAICSYATRAAEKLRSEHQYCRFISAFVKTSPFAHNEPYYSNSASVKLLTPTQDSRD IIGAAMRCLDAIWKDGQRYQKGGVMLGDFYSQGVAQLNLFDENAPRHNSQKLMEVLDRLNAKEGRETLYFAGQGIQPQWR MKREMLSPRYTTRYADLLTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-119 | 60 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-119 | 60 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-90 | 49 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-72 | 48 |
