Gene Information

Name : RORB6_07960 (RORB6_07960)
Accession : YP_007873833.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1774361 - 1774696 bp
Length : 336 bp
Strand : +
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence : 
ATGTTCAGAACAGAAGACATCATCGATGAGATAACCCAATGGATTGATTCAAACTTACACAAACCGCTGAGGATTGAGGA
TGTTGCTGCACGGGCAGGATATTCCAGGTGGCATCTTCAGCGGGTTTTTGTACAGGTAAAAGCAGTGAGCCTGGGGAAAT
ATATCAGAGATAAGAAACTCAGTCTGGCGGCAAAAGATCTTATTGAGACAGATGAACCCGTGATCAGCATAGCCTATAAA
TATGGATTTGACTCACAGCAGACCTTTACACGCATTTTTTCTAAAAATTATAAACTGCCACCATTAAGGTATCGACACGC
TAAAAGAATAAAATAA

Protein sequence : 
MFRTEDIIDEITQWIDSNLHKPLRIEDVAARAGYSRWHLQRVFVQVKAVSLGKYIRDKKLSLAAKDLIETDEPVISIAYK
YGFDSQQTFTRIFSKNYKLPPLRYRHAKRIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-20 45
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 3e-19 45
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 3e-19 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 2e-30 58
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 7e-23 49
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 1e-22 48
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator BAC0560 Protein 7e-23 48
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 8e-23 48
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 7e-23 48
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 6e-23 48
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 5e-21 46
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 7e-21 45
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 5e-21 45
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator BAC0371 Protein 7e-21 45
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 5e-21 45
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 1e-19 45
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 1e-20 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator VFG0585 Protein 4e-21 45
RORB6_07960 YP_007873833.1 AraC family transcriptional regulator VFG1038 Protein 1e-19 45