Gene Information

Name : PALO_04550 (PALO_04550)
Accession : YP_007870884.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Unknown
Product : transposase IS3510b
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1004277 - 1005386 bp
Length : 1110 bp
Strand : -
Note : COG3547 Transposase and inactivated derivatives

DNA sequence :
ATGAACTCCCAGTACCCGGTGGTCATCGGTCTGGATGTCGGAAAGACCGGACACCACGCCTGCGCTCTGGACCCCGACGG
CAGCAAGCTCTTCGACAAGCCCCTCCCACAACACGAGGCAAAGCTGCGTGAGCTCTTCATGGGCCTGCAGAAGCTTGGCG
ACGTGCTGATGATCGTGGACCAGCCCAACACCATCGGGGCGCTGCCGATCGCGGTCGCCAGAGACTGCGGCTGCGCGGTC
GCCTATGTGCCCGGGCTCACGATACGCAAGGCCGCAGACCTCTATCCCGGCAGGTCAAAGACAGACGCGCGCGACGCGTT
CATCATCGCCGACACCGCCCGCACCATGCCCCACACGCTCAGACAGGTCGACCGTGACAGCGAAGTCCTCTCCGCTGTGA
AGGTCCTCGCCGGCTTCGACGAGGACCTCGCCCACGAGACCACCCGGGCGTTGAACCGAATCCGGTCGCTGCTGACGCAG
ATCCATCCCGCACTCGAGCGGGTATTTACCGGCGGCAGCCTTTCCACCGCACTGGTGTTGGATCTGTTAGAGAAGTTTGG
CGGCCCCACCAGGTTGAAAACCGCTGGTCGAGGCAAAGTTCTGAGGTTCGCCAGGTCCCACTCTCGCCGCGATCCAGAAC
CGCTGGTCGATCGAATCTTCACCGCACTGGGCGAGCAGACCGTCATCGTTCCTGCGACCGCCGCAGTGGAGTTGGTAATC
CCCAGAGTCGCTGGTCAAATCAAGGAACTCAAAGCGCAGCAAGCGACGGTGGCCAGGAAGGTCGAGGGGATGCTGGAGGA
CTTCCCTCTCGCGGCGGTCTTGAGGAGCATGCCAGGGATCGGCCTCAAGACCGCCGCGCAGATCCTCTTGGCCATCGGTG
ACGGCTCCGCATTCCAGACTCCCGGACACCTCGCAGCCTATGCAGGCATCACGCCGGTCACGCGAAGATCCGGGACTTCG
ATCCGCAGCGAGTTCCCCGCCCGATCAGGCAACAAACGCCTAAAAACGCCCTGTTCTACTCTGCCTGGGTCGCCTCGAAC
CACGACCCGATCTCGAAGGCCTACTACGACCACAAACGCACCGAGGGCAAGCGCCACAACGCCGCCGTGA

Protein sequence :
MNSQYPVVIGLDVGKTGHHACALDPDGSKLFDKPLPQHEAKLRELFMGLQKLGDVLMIVDQPNTIGALPIAVARDCGCAV
AYVPGLTIRKAADLYPGRSKTDARDAFIIADTARTMPHTLRQVDRDSEVLSAVKVLAGFDEDLAHETTRALNRIRSLLTQ
IHPALERVFTGGSLSTALVLDLLEKFGGPTRLKTAGRGKVLRFARSHSRRDPEPLVDRIFTALGEQTVIVPATAAVELVI
PRVAGQIKELKAQQATVARKVEGMLEDFPLAAVLRSMPGIGLKTAAQILLAIGDGSAFQTPGHLAAYAGITPVTRRSGTS
IRSEFPARSGNKRLKTPCSTLPGSPRTTTRSRRPTTTTNAPRASATTPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 9e-65 51
CDPW8_2181 YP_005143729.1 transposase-like protein Not tested Not named Protein 2e-60 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_04550 YP_007870884.1 transposase IS3510b VFG1494 Protein 5e-65 51