Gene Information

Name : PALO_04235 (PALO_04235)
Accession : YP_007870821.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 927566 - 928849 bp
Length : 1284 bp
Strand : -
Note : COG0213 Thymidine phosphorylase

DNA sequence :
ATGACCACCACCTACTCCGTCCTCGACCTCATCCGCGCCAAGCGCGGAGGTCAGACCCTCGACTCCGATCAGATCCGTTG
GCTCATTCGCGCATACACCGATGGTGTCGTCGCCGATGAACAGATGTCCGCCATGGCCATGGCGGTGTTCTTCCAGGGTC
TGGACGACGAGGAGCTCTCGACCTGGACAACGGCGATGATCGAGTCCGGCGAGCGAATGAGCTTCAAGGGGCTGTCTCGT
CCCACCGTCGACAAGCACTCCACCGGTGGAGTCGGTGACAAGATCACCCTGCCTTTGGCTCCCCTCGTCGCTGCCTGCGG
TGCAGCCGTTCCCCAGCTGTCCGGTCGCGGCCTGGGCCACACCGGCGGCACCCTCGACAAGATGGAGGCAATTCCCGGGT
GGCGAGCCGACCTCTCCCACGACGAGATGGTTGCCCAGCTCGACACTGTCGGCGCCGTCATCTGCGCTGCCGGGCCCGGG
CTTGCCCCCGCGGACAAGAAGCTCTATGCCTTGCGTGACGTCACCGGCACCGTCGAGTCGATCCCCCTCATCGCCTCCTC
GATCATGAGCAAGAAGATCGCCGAGGGCACCGACAGCCTTGTCCTCGACGTCAAGACAGGCTCGGGAGCCTTCATGAAGA
CCGAGGAGGACGCCCGCGAGCTGGCACGTCGTCTCGTCGGCCTGGGCGAGTCCGCCGGCGTGCGCACCACCGCCCTGCTG
ACCAGGATGGACGTCCCGCTGGGGTATGCCTGCGGTAACGGCATCGAGGTGGCCGAGTCCCTCGAGGTGCTGTCCGGCGG
TGGACCTGCCGACGTCGTCGACCTCACCGTCGCGCTGGCCCGCCAGATGGTCAAGGCCGCTGGGCTGGACGGCACTGACC
CGGCCGACGTCCTTGCCAGCGGCAAGGCCATGGACGTCTGGCGCGACATGGTCCGCGCCCAGGGCGGCGACCCCGATGCT
CCGCTGCCGGTGGCTCACCATTCCCAGGACGTCATCGCCTCCGAAGCTGGCGTCGTCACCGGAATCGACGCGATGTCCGT
CGGCCTGGCCGCCTGGCGTCTGGGAGCGGGACGAGCTCGCAAGGAGGATCCGGTACAGGCTGCCGCCGGCGTCATGTTGC
GCGTTCGCCCGGGTGATCGGGTCGTCGCTGGCCAGCCGCTGGCAACCCTGCTCACCGACACCGCCGACACCATCTCGCGC
GCCGAGGACGACCTGACCGACGCCTTCACCGTCGGGAGGTCCTTCCAGCCCCGCACCATCGTCGTCGACACCATTACGGC
CTGA

Protein sequence :
MTTTYSVLDLIRAKRGGQTLDSDQIRWLIRAYTDGVVADEQMSAMAMAVFFQGLDDEELSTWTTAMIESGERMSFKGLSR
PTVDKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGHTGGTLDKMEAIPGWRADLSHDEMVAQLDTVGAVICAAGPG
LAPADKKLYALRDVTGTVESIPLIASSIMSKKIAEGTDSLVLDVKTGSGAFMKTEEDARELARRLVGLGESAGVRTTALL
TRMDVPLGYACGNGIEVAESLEVLSGGGPADVVDLTVALARQMVKAAGLDGTDPADVLASGKAMDVWRDMVRAQGGDPDA
PLPVAHHSQDVIASEAGVVTGIDAMSVGLAAWRLGAGRARKEDPVQAAAGVMLRVRPGDRVVAGQPLATLLTDTADTISR
AEDDLTDAFTVGRSFQPRTIVVDTITA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 5e-104 56