Gene Information

Name : PALO_03730 (PALO_03730)
Accession : YP_007870720.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Unknown
Product : phage-associated protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 821592 - 822893 bp
Length : 1302 bp
Strand : +
Note : COG0553 Superfamily II DNA/RNA helicases, SNF2 family

DNA sequence :
ATGCGCTACCGGCCGCATGACTACCAGCAGACCGCCACCCGGTTCATCCTCGACCACCCAGAGGCCGCCATCCTCCTCGG
GATGGGACTCGGCAAGAGTGTCATCACCCTGACGGCGATCTGGGAGCTGCTGCTGGACTACTTCACCGTCTCTCGCGTCC
TTGTCGTCGCGCCGTTGCGTGTCGCCCGAGACACCTGGCCCGCCGAGGCCGCCAAGTGGGATCACCTCGACGGCCTGTCG
GTGGCGGTGGCTGTAGGCACCAAAGCTGACCGGCTCGACGCACTCGCCAAGTCGGCGATGGTGACCGTCATCAACCGCGA
AAACATCCCCTGGCTCGTCTCCCAGTTGGGTGAGGCGTGGCCGTTCGACATGGTCGTCATCGACGAACTGTCCAGCTTCA
AGAATCATCGGGCGAAGCGGTTCACAGCGTTGGTGAAGATGCGCCCGCACGTCAAGCGCTGGGTCGGCCTGACTGGCACC
CCAGCCTCCAACGGGCTGATGGATATCTGGGCGCAGTTCCGGCTCCTCGACGGCGGGCAACGCCTCGGCAGGTTCATCAC
GCGCTACCGCGACCGCTGGTTTACCCCGGATAAGCGCAACGGGATGCAGGTGTTCACCTACAAGCCCCGCGAGGGTGCGG
AGGACGAGATCTACGAGGCGATCGCCGACATGACGTTGTCGATGCGCACCACCGACCACCTCCAACTCCCGCCGTTGACG
GTGACGACGACACCGGTGGTGCTCGGAGCCCAAGAACGAGTTGTGTATGAGCAGCTGAAGGCCGACCTGGTGGTTGATCT
GGATGGGCAGGTAGTGGATGCCGCGAACGCAGCCGCGCTGTCGGGGAAACTGCTGCAGCTCGCCTCGGGCGCGATCTACG
ACGAGCATGGCGAGACGGTCGAGGTGCATGGGGCGAAACTCGACGCCCTCGAAGACATCCTCGAAGCCGCCAACGGACAA
ACCGTCCTCGTCGCCTACTGGTACCGACACGACCGCGAACGCATCCAGCGTCGCTTCCCGGACGCCCGCGAACTTAGAAT
ATCGGCGGATATTGCGGCGTGGAACCGGGGCGACATCCCGCTCGGGCTGATCCATCCCGCGAGCGCTGGGCATGGGTTGA
ATCTGCAGGCCGGTGGGCACCTGCTCGTGTGGTTCTCGCTGACCTGGAGCATGGAGCTGTATCAGCAGACCAACGCCCGG
CTGTATCGGCAAGGGCAGGCCGATCCGGTCACCACACCCACCTTGCCGCCACCGGCACCCTCGACCAGGCCGTCCTGGGT
GCTTTGGAGGCGAAGGACATGA

Protein sequence :
MRYRPHDYQQTATRFILDHPEAAILLGMGLGKSVITLTAIWELLLDYFTVSRVLVVAPLRVARDTWPAEAAKWDHLDGLS
VAVAVGTKADRLDALAKSAMVTVINRENIPWLVSQLGEAWPFDMVVIDELSSFKNHRAKRFTALVKMRPHVKRWVGLTGT
PASNGLMDIWAQFRLLDGGQRLGRFITRYRDRWFTPDKRNGMQVFTYKPREGAEDEIYEAIADMTLSMRTTDHLQLPPLT
VTTTPVVLGAQERVVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIYDEHGETVEVHGAKLDALEDILEAANGQ
TVLVAYWYRHDRERIQRRFPDARELRISADIAAWNRGDIPLGLIHPASAGHGLNLQAGGHLLVWFSLTWSMELYQQTNAR
LYRQGQADPVTTPTLPPPAPSTRPSWVLWRRRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 2e-76 51
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 5e-81 50
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 2e-85 48
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 3e-85 48
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 2e-82 47