Gene Information

Name : PALO_03545 (PALO_03545)
Accession : YP_007870688.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 778049 - 779380 bp
Length : 1332 bp
Strand : +
Note : COG4175 ABC-type proline/glycine betaine transport system, ATPase component

DNA sequence :
GTGGATTTGGTTCGAGCATCCCATCTGTACAAGGTTTTCGGTAAACACGAACGAGAAGTGATCGAAAGACTCAAAGCAGG
GGAGTCTCGAGAAGATCTTGCCTCTCTCGGTACGGCGGCTGTCATCGATGTCAGCTTGGAGGTCGCCAAGGGAGAGACCT
TCGTCGTCATGGGCCTCTCAGGGTCCGGAAAGTCCACCCTCATCCGGATGATCAACGGGTTGTGGGCGCCCTCCGAGGGC
ACCGTCGAGGTGGCCGGAAAAGTTGTCTCTGACATGAACGACTCCCAATTGCGGGAGCTTCGTCGCGACCATGTGTCGAT
GGTATTCCAGCATTTCGCCCTTCTTCCTCATCTGACTGTTCGCGAGAACGCGGCTTACGGGCTGAAGTTGCAGGGTAAGC
TCAAGCCGAAGGACCGCCTCGAGAAGGCCGATGAGTGGCTGCGGACCGTGGGTCTCAACGGCTGGGGTGGCAAGTACCCC
CATCAGCTCTCAGGTGGTATGCAGCAGCGTGTCGGGTTGGCTCGTGCCCTCGCCGCGGAGACCGACATCCTTCTCATGGA
CGAGGCCTTCTCCGCTCTTGACCCGCTCATCCGTCGTGAGATGCAGGATCAGCTCCTCGAGCTGCAGGGCACCCTCAACA
AGACGATCATCTTCATCACCCACGACCTCAACGAGGCCATGTACCTCGGCGATCACATCGCGGTCATGCGCAATGGTCGT
GTTGCTCAGATCGGTACCTCTGACGAGATCCTCACCCAGCCGGCCGACGACTACGTCGCTGACTTCGTCCAGGATGTCGA
TCGCACTCGGGTTCTGACGGCGTCGGCTGTCATGCGACCCACCGAGGCCGTCGTCTCCAGGTCGGCAGATCCCCGCCGTG
TCCAGCGCATCATGGATCAGCGTGATTGGGCTGGCGTCTTCGTCGTCGACGAGCACCGTCGTCTGCTCGGCATGGTTGGG
GACCAGGAGGTCATCGAGGCTGCTCGCCGTGGCGACCGCAGCATCGCGGCAGTCGTCGAGACCAGCGGCATCCTCACCGT
TCGCACTGACACCCCGCTGTCCGAGTTGTTCGCTCCGTCGAAGGATGCGCGAGTGCCTCTCGCCGTCGTCGACGAGGACT
TCCACCTCATGGGCGTCATTTCCCGAGTCGCTCTGCTCGACTCCATGTCGAGGTCCCAGGACAAGGTGTCCGAAGGATCC
GTGATGTCCCTGGAAGACACTGGGAAGTTGCCTGTCATCAAGGATGTCGGAGATCCCGTCGGTCTCCCGCCTGCTGACCA
GACGACGACCGCGACGGTCGCATCCGCCCCGACCACCGAGAAGGAGGCCTGA

Protein sequence :
MDLVRASHLYKVFGKHEREVIERLKAGESREDLASLGTAAVIDVSLEVAKGETFVVMGLSGSGKSTLIRMINGLWAPSEG
TVEVAGKVVSDMNDSQLRELRRDHVSMVFQHFALLPHLTVRENAAYGLKLQGKLKPKDRLEKADEWLRTVGLNGWGGKYP
HQLSGGMQQRVGLARALAAETDILLMDEAFSALDPLIRREMQDQLLELQGTLNKTIIFITHDLNEAMYLGDHIAVMRNGR
VAQIGTSDEILTQPADDYVADFVQDVDRTRVLTASAVMRPTEAVVSRSADPRRVQRIMDQRDWAGVFVVDEHRRLLGMVG
DQEVIEAARRGDRSIAAVVETSGILTVRTDTPLSELFAPSKDARVPLAVVDEDFHLMGVISRVALLDSMSRSQDKVSEGS
VMSLEDTGKLPVIKDVGDPVGLPPADQTTTATVASAPTTEKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 2e-82 47