|
Name : lysS (PALO_03085) Accession : YP_007870596.1 Strain : Propionibacterium avidum 44067 Genome accession: NC_021064 Putative virulence/resistance : Unknown Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 671689 - 674961 bp Length : 3273 bp Strand : + Note : COG2898 Uncharacterized conserved protein DNA sequence : ATGCCGGTTGTCGTCATACCGCGATTGATGAATGTTGCCGTCCTCCTCATCGTGCTGCGCCTGGTATTCAGCCGCACGAC GTGGGTTGGAGTCGCGAACAACCTGTTCTCGGTGTTCATCTTCCCGATCGACGGCTTCGGATGGGCGGGGGCCGTCGTCC TGGTGGTGCTGGCGGATGCGCTGTCGAGGCGCAAGAGATTCGCCTGGTGGGTGAGCATCATCCTCTTCGGGCTGATGTGG CTCGTTGCGGCCGCGTTTTTCGTCGTTGTTGTTACCGAGGTCATCATGGGTGGCCCGACGGACACCTTCAATGATCTCGA TCTCGCGGGGTATCTGTTCAACGTCTTCTCAGTCGGCTGGATCCTCGTCGCCCTGCTGACTCATCGAAAGGACTTTGCGG CACACACAGTTCGGACCAATCTCGGCAAGGCCATCGCCGTCCTCATTGGCGGGCTGTTGGCGACCGGCTTCATTGGCTGG TTGCTGGTCTCCCTGACCGGCGGTGTCGGACGGCCTCGTAACCGGTTGGTGCGCATTGTCGGTCGGATCATTCGCGGAAA TGGTGTCGAAGTTGCACCTGCTCCCACATCCCCGCACTGGGTGCAGGAAGTGATCTCCTTCCTTCTCGCCCTCGTGCTGG TGGCCGCCCTTGTCGTCATGCTGCGATCTCAGCGCAATATCGCCATGATGAGCCTGTCCGATGAGCTGCGCCTGCGTCGG CTCCTCGAGGAAAATCCGGCGGACTCCCTCGGCTATTTCGCACTGCGCCGTGACAAGGCCGTCGTGTTCTCGCGAAACAG CCATGCGGCAGTGTGCTATCGAACCGAAGCAGGGGTCGCACTGGCCTCGGGAGATCCCGTCGGCCCAGTGGATCAGTGGC CCGGTGCCATTGAGGCATTCCTTGACGTCGCTCACACCTATGGTTGGGTTCCGGCCGTCATCGGCACTTCTGAGGAAGGT GCGACGGCATGGACTCAGGCCGGACTCAAGGCCATGCGCATCGGCGACGAGGCCATTATCTCTCCCGCCGCGTTCAGCCT CGATGATCCCGACCTCAAGCCGGTCCGCCATACCGTCACCAAGTTGCGCGCAATGGGGTACACCACCCGAGTGCGTCGTC ATGAGGACATCGACCCGCAGGAGCTTCAGGGGCTCATCGACCTCACTGACAAATGGCGTCAGAATGGTGACGAGCGAGGG TTTTCAATGGCTCTTTCCCGTCTGGGAGATCCGCTCGACGGGCGATGCGTCATGGTGGAGGCGCTGTACCCCGACGGTGG TCCACGTGCTGGCCAGACGGCAGGAATTCTCTCCTTCACTCCTTGGGGCAATGACGGATTGTCCCTGGACGTCATGCGTC GTGACCTGGACGGAGCCGACAACGGAGTCACCGAGCTCATGGTCGCCGGTCTCATGGCTGCCGGACCGGAGATTGGTATC AGGCGTGTGTCGATGAACTTCGCGGTCTTTCGCGAGGCGATCGAGGAGGGGGCCCGCGTCGGTGCCTCCCCGGTGCGTCG TCTCAACCGCTGGCTCGTGCTCGTTGCGTCGAAGTGGTTCCAGATCGAGCAGCTCTACCGCTCCAACGTCAAGTACAAGC CGAGCTGGCAGACCCGCTACCTCAACTTCACCGATACCTCTGACCTGGCGCAGGTCGGTCTGGCGATGGGTATTGCCGAG GGCCAGCTCGACATTCCGAGTTGGATCTACCCGGTGGAGCCGCCGCCGCAGCCAATTTACTCGATTAGTGGTCACCCCGA GATCGCGGAATTTCTGGCTGAGGAACGCACCCCCGCCCTTCTTCAGCGGCGGCTCCCGGAGCAGGTTCGTGTCCGAATGG CCACGCGTGAGCGGCTCCTCGAGTCCGGGGTGGAGGCATACCCTCCCGACTGCAAGCCCGATCACCGTCCTGGCGACGTC ATCGTCGAGCTGACCGGTCAGGAGATGACGGTCTCCGGGCGGATCGATGCCTGCCGCGATCACGGCGGTGTCATCTTCGT CGATCTGTTCGACTGGACCGGGTCCTGCCAGTTGGTGATGGAGCGTGACTCGCTGGGAGCCGACAGGCTTCGGGAATTCC GGCATGCGGTGTCTCTGGGAGACCACCTCGTGGCATCCGGGACCGTGGGGGCTTCCCGCAATGGAACGCTGAGTTTGGAG ACGGCGTCGTGGCAGTTGGCGGCGAAGTCCCTGCGACCATTGCCGTCGCGGCGGTCAGGATTCAACGACCCTGAGGCGAA GGTTCGACAGCGTTACCTCGATCTCCTCGTCAACCCGGGCGCTCGTGATCAGTTGAGAGCTCGCTCGAACGCCATTCGTG CGGTGCGAGAAACCCTGCTGAGTCACGATTACATCGAGGTCGAGACCCCGATTCTGCAGACGATCCATGGTGGCGCGAAT GCCCGGCCGTTCCGCACCCACATCAACGCTTACGATCTGGACCTTTACCTGCGCATTGCCCCGGAGCTGTACCTCAAGAG GCTCATGGTTGGCGGAGCTGGACGAGTCTTTGAGATCGGCCGGAACTTCCGTAACGAGGGAGCTGACGCCACGCACAACC CCGAGTTCACGATGTTGGAGGCCTATCAGGCCTATGGCGACTACGTGCAAATGCGTCATCTCACGCGCGCGATGATCCTG GCAGCGGCGCGCAACGCCATCGGTGGCACCGTGATTCGGGGGTGCGACCGCAAAGGCGTTGAGCACGAAATCGACCTGGC AGACGACTGGCACGTCATCACCGTCAACGAGGGAATCTCGCGAGGACTGGGGGAGGAGGTCACCGCCGACACCCCCAAGG AGAAACTCCTCGAATACGCCAACAAGCTTGGTATTGCGACGATGCCGAAGTGGAGCCGCGGTGACGTCGTCCTCGAGCTG CACGAACACCTGAGCGAGCACGTCACCGTCGAGCCGACCTTCTTCTGTGACTTCCCGACCGATGTCTCCCCGCTGACCCG TCAGCATCGTGACGATCCGCGCCTGGCCGAGAAGTGGGACCTCATCATCTTCGGGTCTGAGGTGGGTACCGCCTACACCG AGCTCGTCGATCCCGTGATCCAGCGCGAGCGGTTCACCGCCCAGTCATTGCTGGCAGCCGGTGGTGATCCGGAGGCCATG GAACTCGACGAGGACTTCCTGGAGGCTCTCGAATACGCCATGCCGCCATCGGGCGGGATGGGCATGGGCCTGGACCGTTT GGTGATGATGCTGACGAATGCATCAATTCGCGAGACGATTGCCTTTCCACTGGTGCGTCCGCGCATCTCGTGA Protein sequence : MPVVVIPRLMNVAVLLIVLRLVFSRTTWVGVANNLFSVFIFPIDGFGWAGAVVLVVLADALSRRKRFAWWVSIILFGLMW LVAAAFFVVVVTEVIMGGPTDTFNDLDLAGYLFNVFSVGWILVALLTHRKDFAAHTVRTNLGKAIAVLIGGLLATGFIGW LLVSLTGGVGRPRNRLVRIVGRIIRGNGVEVAPAPTSPHWVQEVISFLLALVLVAALVVMLRSQRNIAMMSLSDELRLRR LLEENPADSLGYFALRRDKAVVFSRNSHAAVCYRTEAGVALASGDPVGPVDQWPGAIEAFLDVAHTYGWVPAVIGTSEEG ATAWTQAGLKAMRIGDEAIISPAAFSLDDPDLKPVRHTVTKLRAMGYTTRVRRHEDIDPQELQGLIDLTDKWRQNGDERG FSMALSRLGDPLDGRCVMVEALYPDGGPRAGQTAGILSFTPWGNDGLSLDVMRRDLDGADNGVTELMVAGLMAAGPEIGI RRVSMNFAVFREAIEEGARVGASPVRRLNRWLVLVASKWFQIEQLYRSNVKYKPSWQTRYLNFTDTSDLAQVGLAMGIAE GQLDIPSWIYPVEPPPQPIYSISGHPEIAEFLAEERTPALLQRRLPEQVRVRMATRERLLESGVEAYPPDCKPDHRPGDV IVELTGQEMTVSGRIDACRDHGGVIFVDLFDWTGSCQLVMERDSLGADRLREFRHAVSLGDHLVASGTVGASRNGTLSLE TASWQLAAKSLRPLPSRRSGFNDPEAKVRQRYLDLLVNPGARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGAN ARPFRTHINAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNPEFTMLEAYQAYGDYVQMRHLTRAMIL AAARNAIGGTVIRGCDRKGVEHEIDLADDWHVITVNEGISRGLGEEVTADTPKEKLLEYANKLGIATMPKWSRGDVVLEL HEHLSEHVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAM ELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNASIRETIAFPLVRPRIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-157 | 46 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-157 | 46 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-157 | 46 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-156 | 46 |
