Gene Information

Name : PALO_01510 (PALO_01510)
Accession : YP_007870288.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC type transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 326780 - 327520 bp
Length : 741 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGACCGGATGTGTTGACGTCGACCATCTCTCAGTGCGCTACGGGGAGGTGGTCGCCTTGTCGGGCGTCACCGTCTCCGT
CGAGCCGGGTCGCGTCACCGGTCTCATCGGGATGAACGGGTCAGGCAAGTCCACCCTTTTCAAGGCGATCATGGGGATGG
TTCGGCCCGAACATGGCCGGGTCCTCATCGACGGCGACTCCCCCGCCAAGGCTCGTCGTCACGGCATCGTCGGATATGTC
CCACAGGCCGAGGACGTCGACTGGTCCTTCCCGGTGTCGGTGCGCGATGTCGTCATGATGGGTCGCTACGGCCAGCAGGG
ATTCACCCGACGGCCACGCGCCGAGGATCGCGAGGCCGTGGCAGAGGCCTTGGAACGGGTCGAGCTGGCTGACCTGACGG
ATCGTCAGATCGGCCAGCTGTCGGGCGGCCAACGCAAACGCGCCTTCGTCGCTCGTGGTATTGCCCAGGGAGCTCGCGTC
ATGCTCCTCGACGAGCCCTTCGCCGGGGTCGACAAACGCAGCGAGGCGACGATCGTCAGACTCCTGCGTGACCTTGCCGA
CCAGGGAAGAACCCTCATCGTGTCCACCCATGACCTCCACGCCCTGCCCGACCTCGCCGACGACGCGGTCCTGCTGCTGC
GCACCATCCTGTTCCACGGACCGGTCGCCGAGGCACTACGTCCAGAAAACCTCGCGTTGACCTTCGGGGTCGACGTCACC
GAATCCGGGAGGATGGCATGA

Protein sequence : 
MTGCVDVDHLSVRYGEVVALSGVTVSVEPGRVTGLIGMNGSGKSTLFKAIMGMVRPEHGRVLIDGDSPAKARRHGIVGYV
PQAEDVDWSFPVSVRDVVMMGRYGQQGFTRRPRAEDREAVAEALERVELADLTDRQIGQLSGGQRKRAFVARGIAQGARV
MLLDEPFAGVDKRSEATIVRLLRDLADQGRTLIVSTHDLHALPDLADDAVLLLRTILFHGPVAEALRPENLALTFGVDVT
ESGRMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-41 50
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-42 50
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-42 50
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-42 50
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-42 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_01510 YP_007870288.1 Mn/Zn ABC type transporter ATPase BAC0350 Protein 5e-42 50
PALO_01510 YP_007870288.1 Mn/Zn ABC type transporter ATPase BAC0440 Protein 1e-42 48
PALO_01510 YP_007870288.1 Mn/Zn ABC type transporter ATPase BAC0400 Protein 9e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_01510 YP_007870288.1 Mn/Zn ABC type transporter ATPase VFG0526 Protein 4e-42 50