|
Name : PALO_01505 (PALO_01505) Accession : YP_007870287.1 Strain : Propionibacterium avidum 44067 Genome accession: NC_021064 Putative virulence/resistance : Virulence Product : metal ion ABC transporter membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 325842 - 326783 bp Length : 942 bp Strand : - Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components DNA sequence : ATGAATGCCCTCGTGTGGCTCACCGAACCACTGAGTTACCAGTTCATGGTTCGCGCTCTGACGACCAGCGTCGTCGCGGC CGTCGTCTGTGCCCTGCTGTCGTGCTGGCTCGTGCTGGTCGGATGGTCTCTCATGGGGGACGCCGTCTCCCACGCCGTAC TACCTGGAGTGGCTCTGGCATACATCCTCGACCTGCCCTTCGCCCTCGGCGCCGTGGTCTTCGGCTTCCTCGCCGTCATC CTGATCGGGGTGGTCCGCGGCACCAGCAGGGTCAAGGAGGACGCCGCGATCGGCATCGTCTTCACGACGATGTTCGCCCT CGGTCTCATCCTGATCTCGACGACCCCGAGCCAGACCGACCTCAATCACATCATCTTCGGCAATGTGCTGGGCATCACGA AGGCCGACATGGTTCAGGTAGCGATCCTGGCCGGGATCAGCCTGCTCGTGCTGCTGCTCAAGCGTCGGGATCTCACCCTC TACGCCTTCGACCCCGTCCATGCCCACGCCATCGGTCTGTCCCCACGCCTCCTCGGGGCTCTCCTGCTCGGGATGCTGGC GCTGACGGCGGTCGTCGCCCTGCAGATCGTCGGGGTCGTTCTCGTCGTGGCGATGCTGATCATTCCGGGAGCAACGGCTT ACCTGCTCACCGACCGATTCTCACGGATGCTCGTCATCGCGCCGAGCCTGTCGGCGCTGTGCACGGTGGTCGGCATCTAC CTCAGCTACTGGTTCGACGTCTCCCCCGGCGGCCTGGTCGTCGTCGTGCAGGGCGTGGCATTCCTACTCGTCTACCTCTT CAGCCCGCGCCACGGCGTCGTCACGCGGGCACGTCGCCACAGGCGATCTCAGCCCTCGACGCTCACCCAGACGGCGTCGG TCGCTGAACGGCCCAGCGGTATGGCCCGATCGGCCACGGTAACCTCGATCGAATCGGAGTAA Protein sequence : MNALVWLTEPLSYQFMVRALTTSVVAAVVCALLSCWLVLVGWSLMGDAVSHAVLPGVALAYILDLPFALGAVVFGFLAVI LIGVVRGTSRVKEDAAIGIVFTTMFALGLILISTTPSQTDLNHIIFGNVLGITKADMVQVAILAGISLLVLLLKRRDLTL YAFDPVHAHAIGLSPRLLGALLLGMLALTAVVALQIVGVVLVVAMLIIPGATAYLLTDRFSRMLVIAPSLSALCTVVGIY LSYWFDVSPGGLVVVVQGVAFLLVYLFSPRHGVVTRARRHRRSQPSTLTQTASVAERPSGMARSATVTSIESE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 9e-26 | 50 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 6e-26 | 50 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 9e-26 | 50 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 8e-26 | 50 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 8e-26 | 50 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 6e-29 | 46 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 5e-29 | 46 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 5e-29 | 46 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 5e-29 | 46 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 6e-29 | 46 |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 3e-23 | 41 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 2e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PALO_01505 | YP_007870287.1 | metal ion ABC transporter membrane protein | BAC0442 | Protein | 2e-25 | 51 |
| PALO_01505 | YP_007870287.1 | metal ion ABC transporter membrane protein | BAC0352 | Protein | 4e-26 | 50 |
| PALO_01505 | YP_007870287.1 | metal ion ABC transporter membrane protein | BAC0351 | Protein | 3e-29 | 46 |
| PALO_01505 | YP_007870287.1 | metal ion ABC transporter membrane protein | BAC0441 | Protein | 3e-29 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PALO_01505 | YP_007870287.1 | metal ion ABC transporter membrane protein | VFG0528 | Protein | 3e-26 | 50 |
| PALO_01505 | YP_007870287.1 | metal ion ABC transporter membrane protein | VFG0527 | Protein | 3e-29 | 46 |
