Gene Information

Name : PALO_00125 (PALO_00125)
Accession : YP_007870022.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Unknown
Product : family 5 extracellular solute-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25120 - 26787 bp
Length : 1668 bp
Strand : -
Note : COG4166 ABC-type oligopeptide transport system, periplasmic component

DNA sequence :
ATGCGTCGAATGAGCCCACTCATTGCGCTGTCCCTCGCAGGCTTGATGGCATTGTCAGCTTGTGGCGAGGACGTTGCGGC
CAAGGATGACTCGGCCGCTGGTTCGTCGGCGACGGGAGGCAGCAACAACAGCGCCCCCGCCAAGGATGGGGGTTCGATCA
CCGTTCGCGGCTGCACCCCGCAGAATCCGCTCATTCCGTCCAACACCAACGAGACCTGCGGCGGAAACGTCCTCGACGCC
GTCACCGCTCGTCTCATCCACTACAACTCCGACACCGCCAAGCCGGAGATGGACATCGCCGAGTCCATCGAGACCAAGGA
CAACCAGAACTTCACCGTCAAGATCAAGCCTGGATACAAGTTCTCCGACGGCACCGAGGTCAAGGCCAAGAACTTCGTCG
ACGGCTGGAACTGGGCTGCCTACGGCCCGAACGCCCAGCAGTCCGGCTACTTCTTCGAGCCGATCGAGGGCTACGCCGAC
GAGCAGTGTGACGATGAAGCCTGCAAGACCAAGCCGAAGTCCACGACGATGAGCGGCCTCAAGGTCGTCGACGACCACAC
CTTCACCATCAAGACCACCGAGAGGGTCTCGAACCTCGAGGTGCGTCTGGGCTACACCGCCTTCGCCCCGCTGCCGGATG
CCTTCCTCAAGGATCCGACCGCCAAGAAGTGGGAGAAGATGCCGATCGGCGCCGGACCGTACAAGGTCACCGAGAACACG
GCCACGGCCATCACCGTCTCGAAGAACGACCACTACGCCGGCAAGTACAAGGGCCACGTCGACAAGGTCACCTTCAAGAT
CTACAACGACGCCAGCCCGGCCTACAACGACACCGTCGCCAACCACCTCGACGTCAACGACCTCATCCCGACCGACCAGC
TCACCAACGACCAGTGGAAGAACGACCTGGCCAACCGTTGGGGCATCCGTCAGTCCGGTGTCACCCAAACCCTGACCTAC
TCCGGCAAGGACAAGCAGCTGGCCGACAACAAGGACCTCGTCAAGGCCCTTGCCATGGACATCGACCGCGAAACGATCAC
CAAGCAGATTTTCGCCAGCTCCCGCACCCCCGCCGACGGCTGGGTCTCCCCCGTGGTTGATGGGTACAAGAAGGACCAGT
GCGGCGAGATGTGCAAGTACGACAAGGACAAGGCTCTCGAGCTCTACAAGAAGTCCGGCGGGTACAAGGGCGTCCTGACC
ATTGCGGTCAACGGTGACGGCGACCACAAGGCCTGGTCGCAAGCCATCTGCAACGGGTGGAAGAACGACCTCGGTCTGAA
GTGCCAGCTCAAGGTCACCCCGGATTTCAAGACCCTGCGCGACATGGTCAACAAGCGGTCCGTCGACGGCTTCTTCCGTA
CCGGATGGCAGATGGACTACCCGTCCATCGAGAACTTCCTGACGCCGATGTACGCCACCGGCGCCTCCAGCAATGACAAC
GACTACTCGAACAAGGCCTTCGACGCCAAGCTCAAGGAAGCCGCTGCCGCTACGGACTCCCAGCAGGCCAACAAGCTCTA
CCAGGAGGCCGAGAAGATGCTGGCGGACACCCCGCCGACCGTCCCGCTGTGGACGACCTCGATCCCGTTCGCGTGGTCGG
ACAAGGTCGCCAACGTCAAGCTCACTCCGTTCGGCTCGATTGACCTTCAGTCGGTCAGCGTGAAGTGA

Protein sequence :
MRRMSPLIALSLAGLMALSACGEDVAAKDDSAAGSSATGGSNNSAPAKDGGSITVRGCTPQNPLIPSNTNETCGGNVLDA
VTARLIHYNSDTAKPEMDIAESIETKDNQNFTVKIKPGYKFSDGTEVKAKNFVDGWNWAAYGPNAQQSGYFFEPIEGYAD
EQCDDEACKTKPKSTTMSGLKVVDDHTFTIKTTERVSNLEVRLGYTAFAPLPDAFLKDPTAKKWEKMPIGAGPYKVTENT
ATAITVSKNDHYAGKYKGHVDKVTFKIYNDASPAYNDTVANHLDVNDLIPTDQLTNDQWKNDLANRWGIRQSGVTQTLTY
SGKDKQLADNKDLVKALAMDIDRETITKQIFASSRTPADGWVSPVVDGYKKDQCGEMCKYDKDKALELYKKSGGYKGVLT
IAVNGDGDHKAWSQAICNGWKNDLGLKCQLKVTPDFKTLRDMVNKRSVDGFFRTGWQMDYPSIENFLTPMYATGASSNDN
DYSNKAFDAKLKEAAAATDSQQANKLYQEAEKMLADTPPTVPLWTTSIPFAWSDKVANVKLTPFGSIDLQSVSVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 5e-77 42