Gene Information

Name : PALO_10190 (PALO_10190)
Accession : YP_007871996.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2231052 - 2231813 bp
Length : 762 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGGATGACATGTTGACGCCAACCCGACCCAACCCTCACGCCGTCGCCGAACCTGTCCCCGGCGCTCACCTCCGCACCCT
GGGACTGACGAAGACCTACGGGACGACTCGTGCCCTCGACCACGTCGACATCGCCATCCCGGCCGGCCAGTCGGTCGCCG
TCATGGGGCCGTCCGGATCGGGAAAGACCACCCTGTTGCACTGCCTGTCGGGGATCCTCTCGGCCGACTCCGGCAGCATC
GAGCTGGGTCTGCCCGACCGCGTCGTCAACGTCGAGAGTCTCTCCAGCGAGGGACGGGCCCAACTGCGTCGCCAGTCCCT
CGGGTTCGTCTTCCAGCAAGGAATGCTCGTCCCCGAGCTCACCGCCGTCGAGAACACCGCCCTGCCTCTCATGCTCAATG
GCGCCTCTCGGTCCCAGGCCGTCGGGTACGCCGTCCAGTGGCTGAGCTCGATGGGACTGGGAGGCATGGAGGAACGACGC
ATCGGTCAACTCTCCGGCGGCCAAGCGCAGCGAGTGGCCATCGCCCGATCCCAGGTCATCGACCCGGCGATCGTCTTCGC
CGACGAGCCCACCGGAGCCCTCGACTCGGCCACTGCCGTCGAGGTGATGTCCATCCTGCTCTCGGCGACGACCGGGAGGG
GACGCACCCTCATCGTCGTCACCCATGACGAGGGCGTCGCCCGCCGCTGTCAGCGCATCCTGCGCCTGCAGGACGGCCGG
ATCGTCTCCGACGAGATGCGCCATTCCGACGGGAGGTGGTGA

Protein sequence : 
MDDMLTPTRPNPHAVAEPVPGAHLRTLGLTKTYGTTRALDHVDIAIPAGQSVAVMGPSGSGKTTLLHCLSGILSADSGSI
ELGLPDRVVNVESLSSEGRAQLRRQSLGFVFQQGMLVPELTAVENTALPLMLNGASRSQAVGYAVQWLSSMGLGGMEERR
IGQLSGGQAQRVAIARSQVIDPAIVFADEPTGALDSATAVEVMSILLSATTGRGRTLIVVTHDEGVARRCQRILRLQDGR
IVSDEMRHSDGRW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_10190 YP_007871996.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-32 45