Gene Information

Name : PALO_09510 (PALO_09510)
Accession : YP_007871862.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2060825 - 2061607 bp
Length : 783 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATGTCGACCCCGCCGCGTGCCGCTGGCGAGATCACTCGTCCGACGCCTCGTACCGTCCTGTCCCTGGACCACGTGAG
TCGCTCCTTCGGTGATGGCGAGCGACGGGTCGACGCCATCAAAGACGTCAGTCTGGGCGTCAATCCCGGTATCTTCGCAG
CCGTCATGGGACCATCAGGTTCGGGCAAGTCCACCCTGCTCGGCCTCGCCGGAGGGCTGGATCAGCCCACCTCCGGCACG
GTCTCCGTGTGCGGAGAGCCGCTGGGGGGCATGTCCCGTGACGACCTGGCACGAGTCCGACGCCGTCAGCTCGGCTTCGT
CTTCCAGGACTACAACCTCGTCCCCACCCTCACCGCGGTCGAGAACGTCTCCCTGCCCCTTGAACTCGACGGGGTCTCCG
CCAAGCGGGCCCGCAATGCGGCTGAGATCGCCCTGGAACGTGTCGGTCTGCCCGGACTTGCCGATCGTCACATTGAGAAG
ATGTCGGGGGGACAACGTCAGCGGGTCGCCATCGCGCGCGGCATCGTCGGGGACCGCCGGGTCCTCCTCGCCGACGAGCC
CACCGGTGCCCTTGATTCTGCGACGGGTGACGACATCATGACCCTTATCCGGGCACTTGCTGACGAGGGGGTTGCCGTCG
TCCTGGTGACCCATGAGGCACGCCACGCAGCCTGGGCAGACCGCGTGGTCTTCCTGCGTGACGGCAAGATTGTCGACGAG
TCCCAGGTCGTCAGCGACCCCATGGAACTCCTCAGCGACAACCCGAAGCGCGGGGAGTGGTGA

Protein sequence : 
MMSTPPRAAGEITRPTPRTVLSLDHVSRSFGDGERRVDAIKDVSLGVNPGIFAAVMGPSGSGKSTLLGLAGGLDQPTSGT
VSVCGEPLGGMSRDDLARVRRRQLGFVFQDYNLVPTLTAVENVSLPLELDGVSAKRARNAAEIALERVGLPGLADRHIEK
MSGGQRQRVAIARGIVGDRRVLLADEPTGALDSATGDDIMTLIRALADEGVAVVLVTHEARHAAWADRVVFLRDGKIVDE
SQVVSDPMELLSDNPKRGEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_09510 YP_007871862.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-47 46
PALO_09510 YP_007871862.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-37 45
PALO_09510 YP_007871862.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-40 42