Gene Information

Name : PALO_09295 (PALO_09295)
Accession : YP_007871819.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Unknown
Product : resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2010750 - 2012306 bp
Length : 1557 bp
Strand : -
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
ATGAGTCCGAAAGTCACTACGATCCCCGCCACTAAACCCCTCACCCACGGCAATCTAGGTGCCAGTGCCCGGCAGGTGGT
GAAGCGGGTGGCTGCCTACGCGCGCGTGTCTACCGACATGGAAGAACAGCAATCCTCTTACGCCGCCCAGGTGGATTACT
ACACCCGCCACATCACCACCCACACCGGCTGGCAACTAGTACGTGTCTACACTGATGAGGGCATCTCGGGTACCTCCACG
AAACACCGGGCAGGGTTCCAGCAAATGATCACCGACGCCCTGAGCGGCAATATCGACTTGATCCTCACCAAGAGTGTCTC
GCGTTTCGCCCGCAACACCGTCGACACGCTCACGCATGTGCGCCAGCTCAAAGAAGCAGGCGTCGAAGTGTTCTTTGAGA
AAGAAAACATTTGGACCCTGGACTCTAAAGGCGAACTGCTCATCACCATCATGAGTAGCCTCGCCCAAGAAGAATCCCGC
AGCATTTCAGAGAATGTCACCTGGGGACACCGTAAACGCTTCGCTGATGGGAAAGTCATGGTGCCCTACGCCTCCCTGCT
GGGCGACAAGAAAGGCAAAGACGGAAACCTCGCTATTGACGAGACTCAAGCTCCGATCGTGCGACGCATCTACGCTGATT
ACCTGTCAGGTCAGTCCCCGAAAACCATCGCCGCGACCCTCACCGGTGAGGGCGTGCCCACTCCAAGGGGTAAAACCCGC
TGGTCAACCACCACGATCCGCTCGATCCTAACCAACGAGAAATACAAAGGCGACGCCCTACTACAGAAAACCTTCACCAC
CGACTTTCTCACCAAAACCACCAAGACCAATGAAGGCGAGGTGCCCCAGTACTACGTGAGCGGTAACCACGAGCCGATCA
TCGAGCCGGCTACGTGGGACTTGGTGCAAGCCGAGCTCGCCAGGAGAGCCAAACCCGGCTCCTCCAGTACTCATCCCTTC
GCGTCTCGGATTAAGTGTGGGGGATGGTACGGGCGTAAAACCTGGCACTCCACCAGCAAACACCGCCGCCACATCTGGAG
GTGCAACAGCAAATACGAACGATCCACCGCCTGCACCACACCCCATTTGAGTGAAGACCAGATCCGTGACGCATTCACCC
AAGCCCTCGCCACACTCGCCCCACCGCCCAGCCAAGAAGTTCTCGACGCGATCATCACCCACACCTGCGACACCACCGAG
CTAGAAGAACAACTCGCACGAGAAGCTCTCGCCCGGGACGCAGTATTAGCCAGGCTCAACCAGCTCATCACCACCAACGC
CACCCACGCCCAAGACCAAGACACCTACCAACACACCTTCGACCAACTCCAAACCGACTACGAGCACTACACCCAGCGCT
TCAGCGACCTAGAGACACAGATCCGCCAGAATCACGAAAAGCGCCACCGCATCAAACAAGCCCACGCCTACCGCACCAAC
CACCCCAACCTGACCTACACCGACGACGCCTGGAACGCCCTCATCGACCACGCCACCATCCACACCGGCGGCACCATCGA
CATCCACTTCAAAGACGGCACCGACCAGACCGTTTAA

Protein sequence :
MSPKVTTIPATKPLTHGNLGASARQVVKRVAAYARVSTDMEEQQSSYAAQVDYYTRHITTHTGWQLVRVYTDEGISGTST
KHRAGFQQMITDALSGNIDLILTKSVSRFARNTVDTLTHVRQLKEAGVEVFFEKENIWTLDSKGELLITIMSSLAQEESR
SISENVTWGHRKRFADGKVMVPYASLLGDKKGKDGNLAIDETQAPIVRRIYADYLSGQSPKTIAATLTGEGVPTPRGKTR
WSTTTIRSILTNEKYKGDALLQKTFTTDFLTKTTKTNEGEVPQYYVSGNHEPIIEPATWDLVQAELARRAKPGSSSTHPF
ASRIKCGGWYGRKTWHSTSKHRRHIWRCNSKYERSTACTTPHLSEDQIRDAFTQALATLAPPPSQEVLDAIITHTCDTTE
LEEQLAREALARDAVLARLNQLITTNATHAQDQDTYQHTFDQLQTDYEHYTQRFSDLETQIRQNHEKRHRIKQAHAYRTN
HPNLTYTDDAWNALIDHATIHTGGTIDIHFKDGTDQTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 8e-69 43
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 8e-69 43