Gene Information

Name : PALO_08880 (PALO_08880)
Accession : YP_007871736.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1928249 - 1929007 bp
Length : 759 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGATCACCGCCTCCGACTTGATCATTCGCCGGGGACAGCGGGTTGTCCTCGACAGCGTCGATCTTTCAGCGGATCAGGG
CATGACGATCGGGGTCGTCGGCCCCAATGGCGCAGGAAAGTCGACCTTGTTGTCTGCGCTGTACCGCAACGTCGCGATTG
CCTCCGGACGTGTCACCGTCAACGACCATGACCTCTCAGCCATGAGTCGCCGTGAGATTGCGCGCGAGGTCGCCGTCGTC
TCGCAGATTCCCGATCAAGCCCTGCCACTGACAGTCCGCGACACCGTCGCCCTGGGACGACTCCCCCACCGATCCCTCAT
GGGGTATGGGGACGCGACCGATCGCGACATCGTCGACAATGCCCTGACGAGAACGGACCTGACAGGTCTCGCGGACCGAC
TCGTCACCCAGTTGTCCGGCGGGGAACGTCAGAGGGTTCTCGTCGCCCGGGCCATCGCCCAGCAGGCCGGCCATCTGCTG
CTCGACGAGCCCACCAATCACCTCGACATCGGCCATCAGTTCGCCCTGCTCGACCTCGTCAAGACCATTGACGCCACCAC
CGTCATCGTGCTCCACGATCTCAACCTGGCAGCTCGAGCATGCGACCAATTGGTGTTGCTTGATCAAGGTCGCCTCGTCG
CCTCCGGCCCTTGCGAGGAAGTCCTGCAACCCGACCTGCTGTCACCGATCTACCGAGTCGACGTGGACCGCATTTCCCAC
AACGGCCACATCCATCTTCTGTTCAATCCACCACGATGA

Protein sequence : 
MITASDLIIRRGQRVVLDSVDLSADQGMTIGVVGPNGAGKSTLLSALYRNVAIASGRVTVNDHDLSAMSRREIAREVAVV
SQIPDQALPLTVRDTVALGRLPHRSLMGYGDATDRDIVDNALTRTDLTGLADRLVTQLSGGERQRVLVARAIAQQAGHLL
LDEPTNHLDIGHQFALLDLVKTIDATTVIVLHDLNLAARACDQLVLLDQGRLVASGPCEEVLQPDLLSPIYRVDVDRISH
NGHIHLLFNPPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 4e-60 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_08880 YP_007871736.1 ABC transporter ATP-binding protein BAC0164 Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_08880 YP_007871736.1 ABC transporter ATP-binding protein VFG1042 Protein 4e-32 41