Gene Information

Name : PALO_05510 (PALO_05510)
Accession : YP_007871076.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Unknown
Product : phage-associated protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1218518 - 1219894 bp
Length : 1377 bp
Strand : +
Note : COG0553 Superfamily II DNA/RNA helicases, SNF2 family

DNA sequence :
ATGCACTACACGCCGCATAACTACCAGCAGGCAGCCACTCGTTTCATCATCCACCACGAAGAAGCCGCCATCCTCCTCGG
CATGGGCTTAGGCAAAACCGTCATCACCCTCACCGCCGTGTGGGAGCTGCTCCTGGACTACTTCGAAGTCTCCCGCGTCC
TCGTGGTCGCTCCGCTACGGGTGGCTCGTGACACCTGGCCTGCCGAGCTCGCAAAGTGGAGCCACCTGGCGGGACTGACG
GTGGCGGTGGCTGTCGGCACCAAAGCAGACCGGCTGGACGCGCTCGCGCAGTCGGCGATGGTGACGGTGATTAACCGCGA
AAACATCCCCTGGCTTGTCGCGCATTATGGTGAGGCGTGGCCGTTCGGCATGGTTATCATCGACGAACTCTCCAGCTTCA
AGAATCATCGCGCCAAACGCTTCACCACCCTGGTAAAGATGCGCCCGTATGTGAAGCGCTGGGTCGGGTTGACCGGGACG
CCCGCTTCGAATGGGTTGATGGATTTATGGGCGCAGTTCCGCCTCCTCGACGGCGGTGAACGGCTTGGCAGGTTTATTAC
GCGCTACCGCGACCGCTGGTTTACCCCTGATAAGCGAAACGGGGCGCAGGTGTTTTCGTATAAGCCTCGTGAGGGTGCGG
AGGATGAAATCTACCAAGCGATCGCCGACATGACCCTGTCCATGCGAACCACCGACCACCTCCAACTCCCCAAACTAACG
GTCACCACCCAGCCAGTGATGCTTGGAGCCAGAGAACGCGCGGTCTATTACCGGTTGCGTGAGCAGATGATCCTCGACCT
GGACGGGCAAGTCATTGACGCCGCTAACGCAGCCGCCTTGTCGGGCAAGCTGTTACAGCTCGCTTCCGGTGCGGTCTATG
ACGAACACGGCCAGGTGGCCCAGGTACATAGCGCGAAACTCGACGCGCTCGAAGACCTCATCGAAGCCGCTAACGGTGAG
AACCTGCTAGTGGCGTATTGGTACCGCCACGACGTGGCTAAAATTCGTGACCGGTTCCCACAAGCCAAAGAACTCAAAAC
GGCAGCTGATATCCAGGCGTGGAATAACGGCGACATCAGTCTCGGCCTGATTCACCCGGCCTCCGCTGGGCATGGGCTGA
ACCTCCAGCAAGGTGGGCATCTGCTCGTGTGGTTCTCTCTGACCTGGTCGTTGGAGTTGTATCAGCAAACCAACGCCCGC
CTGTACCGGCAGGGACAAACCCAGCCGGTGACTATCACCCACCTCGCCACTCAAAACACCCTCGACCAAGCCGTCCTCAA
AGCCCTGGAAACCAAGAACACGACTCAGGCTGCGTTGATTGACGCGGTCACCACCGAACTCACAACCACTCCCAGGAAGG
AACCGTCATGCATGTGA

Protein sequence :
MHYTPHNYQQAATRFIIHHEEAAILLGMGLGKTVITLTAVWELLLDYFEVSRVLVVAPLRVARDTWPAELAKWSHLAGLT
VAVAVGTKADRLDALAQSAMVTVINRENIPWLVAHYGEAWPFGMVIIDELSSFKNHRAKRFTTLVKMRPYVKRWVGLTGT
PASNGLMDLWAQFRLLDGGERLGRFITRYRDRWFTPDKRNGAQVFSYKPREGAEDEIYQAIADMTLSMRTTDHLQLPKLT
VTTQPVMLGARERAVYYRLREQMILDLDGQVIDAANAAALSGKLLQLASGAVYDEHGQVAQVHSAKLDALEDLIEAANGE
NLLVAYWYRHDVAKIRDRFPQAKELKTAADIQAWNNGDISLGLIHPASAGHGLNLQQGGHLLVWFSLTWSLELYQQTNAR
LYRQGQTQPVTITHLATQNTLDQAVLKALETKNTTQAALIDAVTTELTTTPRKEPSCM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 2e-88 49
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 4e-84 48
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 4e-93 48
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 1e-93 48
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 5e-88 48