Gene Information

Name : PALO_00550 (PALO_00550)
Accession : YP_007870105.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Virulence
Product : response regulator MprA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 114679 - 115377 bp
Length : 699 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGAGCATGCACATTCTCGTCGTTGACGACGACCGCGCGGTGCGAGAATCCCTCGCCCGATCCCTGCAGTACAGCGGCTA
CGAGGTCGACAGTGCTGCTGACGGCGTCGAGGCCCTCGCACACCTGTCCGGCAGCCATCCTGACGCCGTCATCATGGACG
TCATGATGCCTCGCCTCGACGGTCTCGAGGCCACCCGGATGCTGCGCAGCAACGGCAACGACGTCCCGATCCTCGTCCTC
ACCGCCCGCGACGCTGTCGACGACCGCGTGGATGGCCTGGATGCCGGAGCCGACGACTACATGGTCAAGCCCTTCGCCCT
GGACGAGCTGCTGGCCCGCCTGCGCGCCCTGACTCGTCGTTCCCGTCCCGAGCCGGAACCCGCTGAGGCCCCCGAGCAGC
TGTCCTTCGCCGATCTCACCCTGGACCCAGGCACCCGCGAGGTCGCCCGCGGCAGCCGTCGCATCAGCCTGACGCGCACC
GAGTTCGCCCTGCTCACCGTCTTCCTCCAGAACCCGGAGAAGGTGTTGGAACGCTCGTGGCTGCTGCACGAGGTGTGGGG
ATTCGACTTCCCGACGACCGCCAACTCCCTCGAGGTGTACATCGGCTATCTGCGCCGCAAGACCGAGCATGATGGTGAGC
CGCGTCTCATCCACACCGTCCGCGGCGTCGGGTACGTGCTGCGGGAAGCGAATTCGTGA

Protein sequence :
MSMHILVVDDDRAVRESLARSLQYSGYEVDSAADGVEALAHLSGSHPDAVIMDVMMPRLDGLEATRMLRSNGNDVPILVL
TARDAVDDRVDGLDAGADDYMVKPFALDELLARLRALTRRSRPEPEPAEAPEQLSFADLTLDPGTREVARGSRRISLTRT
EFALLTVFLQNPEKVLERSWLLHEVWGFDFPTTANSLEVYIGYLRRKTEHDGEPRLIHTVRGVGYVLREANS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-29 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_00550 YP_007870105.1 response regulator MprA BAC0083 Protein 4e-33 45
PALO_00550 YP_007870105.1 response regulator MprA BAC0125 Protein 3e-30 43
PALO_00550 YP_007870105.1 response regulator MprA HE999704.1.gene1528. Protein 1e-33 42
PALO_00550 YP_007870105.1 response regulator MprA BAC0308 Protein 7e-31 42
PALO_00550 YP_007870105.1 response regulator MprA AE000516.2.gene3505. Protein 3e-30 42
PALO_00550 YP_007870105.1 response regulator MprA NC_002952.2859905.p0 Protein 1e-31 41
PALO_00550 YP_007870105.1 response regulator MprA NC_007793.3914279.p0 Protein 9e-32 41
PALO_00550 YP_007870105.1 response regulator MprA NC_007622.3794472.p0 Protein 1e-31 41
PALO_00550 YP_007870105.1 response regulator MprA NC_002745.1124361.p0 Protein 9e-32 41
PALO_00550 YP_007870105.1 response regulator MprA NC_009782.5559369.p0 Protein 9e-32 41
PALO_00550 YP_007870105.1 response regulator MprA NC_002951.3237708.p0 Protein 9e-32 41
PALO_00550 YP_007870105.1 response regulator MprA NC_003923.1003749.p0 Protein 9e-32 41
PALO_00550 YP_007870105.1 response regulator MprA NC_002758.1121668.p0 Protein 9e-32 41
PALO_00550 YP_007870105.1 response regulator MprA NC_009641.5332272.p0 Protein 9e-32 41
PALO_00550 YP_007870105.1 response regulator MprA NC_013450.8614421.p0 Protein 9e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_00550 YP_007870105.1 response regulator MprA VFG1390 Protein 4e-67 70
PALO_00550 YP_007870105.1 response regulator MprA VFG1389 Protein 5e-41 49
PALO_00550 YP_007870105.1 response regulator MprA VFG1386 Protein 2e-42 45
PALO_00550 YP_007870105.1 response regulator MprA VFG0596 Protein 1e-29 41