Gene Information

Name : BN843_340 (BN843_340)
Accession : YP_007867113.1
Strain : Staphylococcus aureus M1
Genome accession: NC_021059
Putative virulence/resistance : Unknown
Product : Cassette chromosome recombinase B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 37568 - 39196 bp
Length : 1629 bp
Strand : -
Note : -

DNA sequence :
ATGAAACAACTCAAAAAGAAACGTATTGGATTATATGCACGTGTATCGACTGAAATGCAAACGGATGGTTACAGTATTCA
AGGTCAATTGAATCAACTTACAGAGTATTGTCAATTTCAAGGCTATGAAGTCGTCAATGAATACACCGATCGTGGTATAT
CAGGTAAAACAATGCAACGTCCAGAATTACAACGTATGTTAAAAGATGCCAACGAAGGTAAATTAGATTGTATTATGGTC
TACAAAACAAATCGTTTAGCTAGAAATACCTCAGATTTGTTAAATATTGTCGAGGAATTGTATAAGATTAATGTCGAATT
TTTTAGTCTAACTGAAAAAATAGAAATTGCCAGTTCAACAGGTAAATTGATGCTCCAAATTTTAGCCAGCTTCGCAGAAT
TTGAACGTAATACGATTGTAGAGAATGTCTACAATGGCCAAAGACAACGTGCTATTGAAGGTTATTATCAAGGTAATTTA
CCTCTAGGCTACGATAAAGTACCTGACAGTAAAAAAGAGCTCATGATCAATCAACATGAAGCGAATATTGTTAAATATAT
TTTTGATTCATACGCTAAAGGTCATGGTTATCGTAAGATTGCGAACGCATTGAATCATAAAGGTTATGTGACTAAGAAAG
GGAAACCTTTTAGTATTTCGTCCATTACCTACATCATCTCAAACCCTTTTTACATTGGAAAGATACAGTTTGCGAAGTAT
AGACACTGGAGCGATAAAAGACGAAAAGGACTCAATGAGGAACCGATTATCGCTGATGGTAAACATGCGCCTATTATTGA
TAGAAACCTATGGGATAAAGTACAGTTTAAACGTCAAGAGAGTCGCAAGAAACCACAAGTTCACGGCAAAGGAACAAACC
TACTGACTGGGATTGTAAAATGTCCGAAATGTGGTGCAGCAATGGCGGCAAGTAATACAACTAATACATTAAAAGATGGC
ACTAAGAAAAGAATCAGATATTACTCATGTAGCAATTTTAGAAATAAAGGTTCAAAAGTTTGTTCTGCCAATAGCGTTAG
AGCAGATGTACTAGAAAAATATGTTATGGATCAGATATTGGAAATTATCAAAAGCAAAAAGGTATTGAAGCAATTGGTTG
AAAAGGTAAATGAAAAAAGTCAAATAGACGTCTCTTCTTTGAACCATGATATTGCCTATAAACAGTCACAATGTGAAGAA
ATAAAAGCAAAAATGCATACATTAACGAAAACTATTGAAGACTCACCTGACTTAGATAGCGTATTAAAACCAACAATACT
TAGCTACCAAGATGAATTGAATCAAATAAATAATCAAATCTATCAACTAGAACAAGATAAACAAGCAGAAGCTCCACATT
ATGATGCTGATATGATTGCGAATGTACTACAAGCAATATTCAAAGATATAGACAAATTAGAGAAATCTCAGTTGAAATCA
CTATATCTAACAATCATCGATCGCATTGACATAAGAAAAGATGAGCATCATAAGAAGCAATTTTATGTTACGCTCAAGTT
AAATAATGATATAATCAAACAACTATTTAATAACCATCCACTCGACGAAGTGCTCCCTAGCACTTCGTCTTTATTTTTGC
CACAAACTTTATATATAACTATTGAATAA

Protein sequence :
MKQLKKKRIGLYARVSTEMQTDGYSIQGQLNQLTEYCQFQGYEVVNEYTDRGISGKTMQRPELQRMLKDANEGKLDCIMV
YKTNRLARNTSDLLNIVEELYKINVEFFSLTEKIEIASSTGKLMLQILASFAEFERNTIVENVYNGQRQRAIEGYYQGNL
PLGYDKVPDSKKELMINQHEANIVKYIFDSYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYIISNPFYIGKIQFAKY
RHWSDKRRKGLNEEPIIADGKHAPIIDRNLWDKVQFKRQESRKKPQVHGKGTNLLTGIVKCPKCGAAMAASNTTNTLKDG
TKKRIRYYSCSNFRNKGSKVCSANSVRADVLEKYVMDQILEIIKSKKVLKQLVEKVNEKSQIDVSSLNHDIAYKQSQCEE
IKAKMHTLTKTIEDSPDLDSVLKPTILSYQDELNQINNQIYQLEQDKQAEAPHYDADMIANVLQAIFKDIDKLEKSQLKS
LYLTIIDRIDIRKDEHHKKQFYVTLKLNNDIIKQLFNNHPLDEVLPSTSSLFLPQTLYITIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0056 NP_763611.1 cassette chromosome recombinase B Not tested SCCpbp4 Protein 0.0 99
ccrB4 DAA01835.1 cassette chromosome recombinase B type 4 Not tested SCCpbp4 Protein 0.0 99
ccrB3 YP_005754051.1 site-specific recombinase CcrB3 Not tested Type-XI SCCmec Protein 0.0 75
ccrB1 BAB83487.2 site-specific recombinase Not tested SCC 12263 Protein 0.0 75
ccrB YP_042165.1 site-specific recombinase Not tested SCC476 Protein 0.0 75
ccrB3 BAB47597.1 cassette chromosome recombinase B3 Not tested Type-III SCCmec Protein 0.0 74
ccrB3 BAB46972.1 cassette chromosome recombinase B3 Not tested Type-IIIinv SCCmec Protein 0.0 74
ccrB BAB72128.1 cassette chromosome recombinase B Not tested Type-IVb SCCmec Protein 0.0 73
ccrB BAB72109.1 cassette chromosome recombinase B Not tested Type-IVa SCCmec Protein 0.0 73
SSP0035 YP_300125.1 cassette chromosome recombinase B Not tested SCC15305RM Protein 0.0 73
ccrB NP_370585.1 cassette chromosome recombinase B Not tested Type-II SCCmec Protein 0.0 73
ccrB NP_373297.1 cassette chromosome recombinase B Not tested Type-II SCCmec Protein 0.0 73
ccrB YP_039530.1 site-specific recombinase Not tested Type-II SCCmec Protein 0.0 73
ccrB BAA82196.1 site-specific recombinase Not tested Type-II SCCmec Protein 0.0 73
SERP2499 YP_190041.1 cassette chromosome recombinase B Not tested Type-II SCCmec Protein 0.0 73
ccrB2 BAC67561.1 cassette chromosome recombinase B2 Not tested Type-IVc SCCmec Protein 0.0 73
SAMSHR1132_00400 YP_005324563.1 site-specific recombinase Not tested Type-IIIinv SCCmec Protein 0.0 73
ccrB YP_492757.1 cassette chromosome recombinase B Not tested Type-IV SCCmec Protein 0.0 73
SE0036 NP_763591.1 cassette chromosome recombinase B Not tested SCCpbp4 Protein 0.0 72
ccrB NP_644853.1 cassette chromosome recombinase B Not tested Type-IV SCCmec Protein 0.0 72
ccrB2 DAA01833.1 cassette chromosome recombinase B type 2 Not tested SCCpbp4 Protein 0.0 72