Gene Information

Name : BN843_18300 (BN843_18300)
Accession : YP_007868895.1
Strain : Staphylococcus aureus M1
Genome accession: NC_021059
Putative virulence/resistance : Virulence
Product : Leukotoxin LukD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1945917 - 1946900 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATGAAAAAATTAGTCAAATCATCAGTTGCTTCATCAATTGCACTGCTTTTGCTATCGAATACAGTTGATGCAGC
TCAACATATCACACCTGTAAGCGAGAAAAAAGTAGATGACAAAATCACTTTATACAAAACAACAGCAACATCTGATAATG
ATAAATTGAATATTTCTCAAATTTTAACGTTTAATTTCATTAAGGATAAAAGTTATGACAAAGATACGTTAGTACTTAAG
GCAGCCGGAAACATTAATTCAGGTTATAAAAAGCCTAATCCAAAAGATTACAATTACTCACAGTTTTATTGGGGCGGTAA
GTATAATGTTTCGGTTAGTTCAGAATCAAATGATGCTGTAAATGTTGTTGACTATGCACCTAAAAATCAAAATGAAGAAT
TCCAAGTTCAACAAACATTAGGTTATTCTTATGGCGGAGATATTAATATATCTAATGGCTTATCAGGTGGATTAAATGGA
TCAAAATCATTTTCAGAAACGATAAATTATAAACAAGAAAGTTACAGAACTACGATTGATAGAAAAACAAATCATAAATC
AATTGGCTGGGGTGTTGAGGCGCACAAAATTATGAATAATGGTTGGGGACCATATGGTAGAGATAGTTATGACCCAACAT
ATGGTAATGAACTGTTTTTAGGCGGTAGACAAAGTAGTTCAAATGCTGGTCAAAATTTCTTGCCAACACATCAAATGCCT
TTATTGGCGCGTGGTAACTTTAACCCAGAATTTATAAGCGTACTTTCTCATAAACAAAATGATACAAAAAAATCTAAAAT
CAAAGTAACTTACCAAAGAGAAATGGATAGATATACTAATCAATGGAATCGACTACACTTGGTTGGTAATAACTACAAAA
ATCAAAATACAGTAACGTTTACATCTACTTATGAAGTTGACTGGCAAAACCATACTGTTAAATTAATCGGTACGGATTCT
AAAGAAACTAATCCTGGAGTATAA

Protein sequence :
MKMKKLVKSSVASSIALLLLSNTVDAAQHITPVSEKKVDDKITLYKTTATSDNDKLNISQILTFNFIKDKSYDKDTLVLK
AAGNINSGYKKPNPKDYNYSQFYWGGKYNVSVSSESNDAVNVVDYAPKNQNEEFQVQQTLGYSYGGDINISNGLSGGLNG
SKSFSETINYKQESYRTTIDRKTNHKSIGWGVEAHKIMNNGWGPYGRDSYDPTYGNELFLGGRQSSSNAGQNFLPTHQMP
LLARGNFNPEFISVLSHKQNDTKKSKIKVTYQREMDRYTNQWNRLHLVGNNYKNQNTVTFTSTYEVDWQNHTVKLIGTDS
KETNPGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lukD NP_372343.2 leukotoxin F-subunit Virulence vSa¥â Protein 3e-129 99
lukD NP_374926.1 leukotoxin, LukD Virulence vSa¥â Protein 3e-129 99
lukD YP_186707.1 leukotoxin LukD Virulence vSa¥â Protein 3e-129 99
lukD NP_646584.1 leukotoxin Virulence vSa¥â Protein 3e-129 99
lukD YP_001332752.1 leukocidin LukD precursor Virulence vSa¥â Protein 3e-129 99
lukD YP_494459.1 leukotoxin LukD Virulence vSa¥â Protein 3e-129 99
SAKOR_01767 YP_008491955.1 Leukocidin F subunit lukD Virulence vSa¥â Protein 3e-129 99
SAOV_1908 YP_005737353.1 Panton-Valentine leukocidin LukF-PV chain precursor Virulence ¥ÕSa3 Protein 1e-107 85
lukF NP_646195.1 Panton-Valentine leukocidin chain F precursor Virulence ¥ÕSa2 Protein 6e-105 83
lukF-PV YP_494078.1 Panton-Valentine leukocidin, LukF-PV Virulence ¥ÕSa2 Protein 6e-105 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN843_18300 YP_007868895.1 Leukotoxin LukD VFG1276 Protein 2e-105 83
BN843_18300 YP_007868895.1 Leukotoxin LukD VFG1275 Protein 4e-101 75