Gene Information

Name : F750_5037 (F750_5037)
Accession : YP_007861959.1
Strain : Streptomyces sp. PAMC26508
Genome accession: NC_021055
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transport system ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5242877 - 5243704 bp
Length : 828 bp
Strand : +
Note : -

DNA sequence :
GTGGCCGAGCACACTCTCCGGGCCAGGGGCGTCCGCCTCGGCTACGGCGACCGGGAGATCGTCTCCGGGCTGGACGTGAC
CGTCCCGCCGGGGCGGATCACCGTCATCGTGGGCCCGAACGCGTGCGGGAAGTCGACCCTGCTGCGGGCGATGGCGCGGC
TGCTCGCACCCTCGGAGGGCGCCGTCCTGCTGGACGGCCGGAGCATCCAGGACATGCCGACGAAGGAGGTCGCCGCGGTG
CTCGGCATCCTGCCGCAGAGCCCGTCCGCCCCGGAGGGCATCACGGTCTCCGACCTCGTGGGGCGCGGCCGCTATCCGCA
CCAGGGCTGGTTCCGGCGCTGGGCCGCCGAGGACGACGAGGCGGTCGCCCGGGCGCTGCTCTCCACCGGCACGCTGGACC
TCGCCGACCGGCCGGTGGACGAGCTCTCGGGCGGGCAGCGCCAGCGGGTGTGGATCGCCATGGCGCTCTCGCAGCGCACG
GACATCCTGCTGCTGGACGAGCCGACCACCTTCCTGGACGCCAGCCACCAGTTGGACGTCCTGGACCTGCTCACCGACCT
GAACCACGAGCACGGCGTCACCATGGTGGCGGTGCTGCACGACCTGAACCTGGCCTGCCGTTACGCCGACCACATGATCG
CCATGAAGGACGGGCGGATCGTCGCCGAGGGCCGGCCCTCGGACATCGTGACGGAGCCGCTGGTCGGTGAGGTGTTCGGG
ATGCGCTGCTCGGTCATGGAGGACCCGGCGTCCGGCACGCCGATGGTGGTGCCGCTGGGCCGCCACCACGTGAGGGAAGC
GGGCGCCCACCCCGCCGCCCGCTCATGA

Protein sequence :
MAEHTLRARGVRLGYGDREIVSGLDVTVPPGRITVIVGPNACGKSTLLRAMARLLAPSEGAVLLDGRSIQDMPTKEVAAV
LGILPQSPSAPEGITVSDLVGRGRYPHQGWFRRWAAEDDEAVARALLSTGTLDLADRPVDELSGGQRQRVWIAMALSQRT
DILLLDEPTTFLDASHQLDVLDLLTDLNHEHGVTMVAVLHDLNLACRYADHMIAMKDGRIVAEGRPSDIVTEPLVGEVFG
MRCSVMEDPASGTPMVVPLGRHHVREAGAHPAARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-63 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-68 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-68 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-60 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-60 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-61 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-61 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-49 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-52 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-51 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-51 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-51 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-51 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F750_5037 YP_007861959.1 ABC-type Fe3+-siderophore transport system ATPase component BAC0164 Protein 1e-49 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F750_5037 YP_007861959.1 ABC-type Fe3+-siderophore transport system ATPase component VFG0925 Protein 4e-76 57
F750_5037 YP_007861959.1 ABC-type Fe3+-siderophore transport system ATPase component VFG1042 Protein 1e-49 43