Gene Information

Name : F750_4049 (F750_4049)
Accession : YP_007860978.1
Strain : Streptomyces sp. PAMC26508
Genome accession: NC_021055
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transport system ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4227370 - 4228224 bp
Length : 855 bp
Strand : -
Note : -

DNA sequence : 
ATGACGACCACCCGTACCGAGAACGGCGCCACGTCCAGGCTCGCGGCGCACTCCCTGACGCTGGCCTACGACGACCGCAC
CGTCGTCCACGAGCTGGACCTGGCCGTTCCCGACGGCTGCGTGACGGTCATCGTCGGCCCGAACGCCTGCGGCAAGTCCA
CGACGCTGCGGGCCCTCGGCAGGCTCCTGAAGCCCGCCGGCGGGTCGGTGCTCCTGGACGGCACGGAGCTCTCGCGCATC
CCCACCCGCACGATCGCCCAGTCGGTCGGGCTGCTCCCGCAGACGCCCGTGGCCCCCGAGGCGATCACCGTCTCGGACCT
GGTCGCCCGGGGCCGCCAGCCGCACCAGCGCTGGTGGCAGCAGTGGTCGGACGAGGACGAGCGCGCGGTGACGGAGGCCA
TGGAGCGCACGGACGTCACGGCGCTCGGCGACCGGCCGGTGGACGAGCTGTCCGGGGGCCAGCGCCAGCGCGTGTGGATC
GCGATGGCGCTCGCACAGGACACGGACCTGCTGCTGCTCGACGAACCCACGACCTACCTCGACATCGCCCACCAGGTCGA
GGTCCTGGACCTGGTGCGTCGGCTCGCCGCCCCGGCGGCGGACGGCACCCGCGGACGGACCGTCGTGACCGTCCTGCACG
ACCTCAACCAGGCCGCCCGGTACGCCGACCACCTCGTGGCCATGAAGGAGGGCCGCATCGTCGCCGAGGGACGGCCCGGT
GACGTCGTCACGGCCGGGCTGGTGCGGGAGGTCTTCGGTCTGGAGGCCGTCGTCGTCCCCGACCCGGTCACGGGTTCGCC
GCTCGTCGTGCCCGGAGCGCCCTGGGCTCCCGCCCCGGCCGGTCCGACCGGGTAG

Protein sequence : 
MTTTRTENGATSRLAAHSLTLAYDDRTVVHELDLAVPDGCVTVIVGPNACGKSTTLRALGRLLKPAGGSVLLDGTELSRI
PTRTIAQSVGLLPQTPVAPEAITVSDLVARGRQPHQRWWQQWSDEDERAVTEAMERTDVTALGDRPVDELSGGQRQRVWI
AMALAQDTDLLLLDEPTTYLDIAHQVEVLDLVRRLAAPAADGTRGRTVVTVLHDLNQAARYADHLVAMKEGRIVAEGRPG
DVVTAGLVREVFGLEAVVVPDPVTGSPLVVPGAPWAPAPAGPTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-60 57
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-51 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-51 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-51 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-51 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-46 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-50 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-50 46
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-28 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-42 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-42 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-42 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F750_4049 YP_007860978.1 ABC-type Fe3+-siderophore transport system ATPase component BAC0164 Protein 9e-47 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F750_4049 YP_007860978.1 ABC-type Fe3+-siderophore transport system ATPase component VFG0925 Protein 3e-55 52
F750_4049 YP_007860978.1 ABC-type Fe3+-siderophore transport system ATPase component VFG1042 Protein 8e-47 47