Gene Information

Name : J112_19690 (J112_19690)
Accession : YP_007856720.1
Strain : Mycobacterium tuberculosis Beijing/NITR203
Genome accession: NC_021054
Putative virulence/resistance : Unknown
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4101633 - 4103279 bp
Length : 1647 bp
Strand : -
Note : COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase

DNA sequence :
ATGAGCGTCCCAGCAGCGCCGCTGTTGTCGGTGGAGGGCCTGGAAGTTACGTTCGGCACCGATGCTCCCGCCGTGTGTGG
GGTGGATCTGGCCGTCCGGAGCGGTCAAACCGTCGCCGTGGTGGGTGAGTCCGGGTCGGGCAAATCCACGACGGCCGCGG
CGATTCTTGGGTTGCTTCCGGCTGGTGGACGGATCACCGCTGGACGCGTTGTGTTCGACGGGCGCGACATCACCGGGGCC
GATGCCAAGCGGCTACGGTCGATAAGGGGACGGGAGATCGGCTATGTTCCCCAGGATCCGATGACCAACCTCAATCCGGT
TTGGAAGGTCGGCTTTCAGGTCACAGAAGCGTTGCGGGCCAATACCGACGGTCGCGCAGCACGACGACGGGCGGTGGAGC
TACTCGCTGAGGCGGGCCTGCCGGATCCGGCGAAGCAAGCCGGACGCTACCCGCATCAGCTGTCCGGCGGCATGTGCCAG
CGGGCGTTGATTGCGATCGGCTTGGCGGGCAGGCCGCGGCTGCTGATCGCCGATGAGCCGACGTCCGCGTTGGATGTCAC
CGTGCAGCGGCAGGGGCTCGATCATCTTCAGGGACTCACCGACGAACTAGGCACCGCGCTGCTACTGATCACCCACGATC
TGGCGTTGGCCGCGCAGCGGGCCGAGGCTGTCGTCGTCGTCCGTCGTGGAGTGGTGGTGGAATCCGGTGCGGCGCAGTCA
ATCCTGCAAAGCCCTCAGCACGAGTACACCCGGCGCCTGGTGGCCGCGGCTCCATCGCTGACGGCGCGCAGCAGACGTCC
GCCGGAATCCCGGTCACGGGCAACCACGCAGGCCGGCGACATTCTCGTCGTCTCGGAGCTGACCAAGATTTACCGGGAGT
CCCGCGGCGCACCGTGGCGGCGGGTGGAGTCTCGCGCCGTCGACGGAGTGTCATTCCGGCTACCGCGGGCGAGCACCCTG
GCAATCGTCGGCGAATCCGGGTCAGGCAAGTCGACGCTAGCGCGGATGGTGCTTGGGCTGCTCCAACCTACCTCGGGCAC
GGTCGTTTTCGACGGCACCTACGACGTCGGCGCGCTGGCCCGGGACCAGGTGCTGGCCTTTCGCCGCCGGGTCCAGCCGG
TGTTCCAAAACCCATACAGCAGCCTGGATCCCATGTACTCGGTGTTTCGCGCCATCGAGGAACCGTTACGCGTCCATCAC
GTCGGTGACCGCCGGCAGCGGCAAAGGGCGGTGCGTGAGCTGGTCGATCAGGTGGCGCTGCCGTCGTCGATACTGGGCCG
GCGGCCCCGTGAGCTGTCGGGTGGTCAGCGGCAGCGGGTAGCGATCGCGCGTGCGCTGGCGCTGCGCCCGGAGGTATTGG
TGTGCGACGAAGCGGTGTCGGCGCTCGACGTATTGGTGCAGGCACAGATCCTGGATCTGCTGGCCGATCTGCAGGCCGAC
CTGGGTTTGACGTATTTGTTCATCAGCCATGATCTGGCGGTGATCCGGCAGATTGCCGACGACGTCCTGGTCATGCGGGC
CGGCCGGGTGGTGGAGCACGCCTCTACCGAGGAGGTGTTCAGCCGCCCCCGCCACGAGTACACCCGCCAGTTGCTTCAGG
CCATTCCCGGTGCCCCCTCAGCTCCCCGAAAGGTTGGCAACCTGTGA

Protein sequence :
MSVPAAPLLSVEGLEVTFGTDAPAVCGVDLAVRSGQTVAVVGESGSGKSTTAAAILGLLPAGGRITAGRVVFDGRDITGA
DAKRLRSIRGREIGYVPQDPMTNLNPVWKVGFQVTEALRANTDGRAARRRAVELLAEAGLPDPAKQAGRYPHQLSGGMCQ
RALIAIGLAGRPRLLIADEPTSALDVTVQRQGLDHLQGLTDELGTALLLITHDLALAAQRAEAVVVVRRGVVVESGAAQS
ILQSPQHEYTRRLVAAAPSLTARSRRPPESRSRATTQAGDILVVSELTKIYRESRGAPWRRVESRAVDGVSFRLPRASTL
AIVGESGSGKSTLARMVLGLLQPTSGTVVFDGTYDVGALARDQVLAFRRRVQPVFQNPYSSLDPMYSVFRAIEEPLRVHH
VGDRRQRQRAVRELVDQVALPSSILGRRPRELSGGQRQRVAIARALALRPEVLVCDEAVSALDVLVQAQILDLLADLQAD
LGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSRPRHEYTRQLLQAIPGAPSAPRKVGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-117 58
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-54 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-54 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-54 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-54 41