Gene Information

Name : CLS_08130 (CLS_08130)
Accession : YP_007848554.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Unknown
Product : Site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 785273 - 786514 bp
Length : 1242 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGAAGTAAGACGAGACAACAAAGGTCGCAAGTTATTTAATGGAGAGAGCCAGCGCAAAGACGGGAAATACGAATA
CAAGTATCAGGATGCATGGGGCAAGAGAAAGACGGTGTACAGTTGGAAACTGACTCCGGCTGATCGAGTTCCGGCAGGAA
AACGTGATGATATTTCCCTGAGAGAAAAAATTAAGCAGATTCAAAAGAATTTAAACAGCAATATCACACCGGATGGCGGT
AATTTTACAGTTCTGGAACTGGTGGAAAAATATATTTCACAGAAAACTGGTGTTCGTCATAACACAAGGTCAAATTACAA
CTTTGTGGTCAATGTAATCAAAAAGGAAGACTTTGGGCAGAAGCGCATTGACAAGATTAAGGTGTCCGATGCCAAAGAAT
GGCTGATAAAAATGCAGCAGATTGATGGGCGTGGTTACAGTTCCATTCACACGATCCGAGGTGTCGTAAGACCTGCCTTT
CAGATGGCGGTGGATGATGATTTGCTGGTAAAGAATCCGTTTGAATTTCAGCTGAACACCGTTGTTGTGAACGATAGTGT
CACAAGAGAAGCTATCACACGACAGCAGGAAAGAGATTTCTTGGAGTTTGTGAAGAACGACAAGCATTTCTGTAAGTACT
ATGACGGTATCTATATCCTGTTTAAGACAGGACTTCGTATTTCTGAGTTTGTTGGATTGACAAAGAAGAACCTTGATTTT
GAGAACAGCAGAATTATCGTAGATCATCAGCTTCAGAGAACCAGAGATATGAAATATATTATTGAAGATACCAAGACAGA
AAGTGGCGAGCGCATGGTGCCTATGACACCGGAAGTGAAGGAAGCGTTTCAGCGTATCCTTGCCAACAGAAAGAATCCAA
AGGTTGAGCCTATGGTAGATGGGTACAGTGGATTCTTGTTTTTGGATAAGAACGGCAGACCGATGGTGGCACTTCACTGG
GAGAAATATTTCCAGCATATCCGTGAGAAGTACAACAAGATTTACAGAGTACAGATGCCGAAAGTTACTCCTCATGTTTG
CAGACACACTTTCTGTTCCAATATGGCGAAGTCCGGTATGAATCCAAAAACGCTTCAATATATCATGGGTCATAGTGACA
TCAGTGTAACACTGAATGTTTACACGCATCTAAACTACGATGATGCAGAGGAAGAAATGCAGAAAGTAGTGGGTACAGCT
TCTATGAAATCGACAACGCACCGTAAAAGGTGCGTGTCGTAA

Protein sequence :
MSEVRRDNKGRKLFNGESQRKDGKYEYKYQDAWGKRKTVYSWKLTPADRVPAGKRDDISLREKIKQIQKNLNSNITPDGG
NFTVLELVEKYISQKTGVRHNTRSNYNFVVNVIKKEDFGQKRIDKIKVSDAKEWLIKMQQIDGRGYSSIHTIRGVVRPAF
QMAVDDDLLVKNPFEFQLNTVVVNDSVTREAITRQQERDFLEFVKNDKHFCKYYDGIYILFKTGLRISEFVGLTKKNLDF
ENSRIIVDHQLQRTRDMKYIIEDTKTESGERMVPMTPEVKEAFQRILANRKNPKVEPMVDGYSGFLFLDKNGRPMVALHW
EKYFQHIREKYNKIYRVQMPKVTPHVCRHTFCSNMAKSGMNPKTLQYIMGHSDISVTLNVYTHLNYDDAEEEMQKVVGTA
SMKSTTHRKRCVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0917 YP_001198283.1 Tn916, transposase Not tested 89K Protein 6e-88 51
SSU98_0923 YP_001200481.1 Tn916, transposase Not tested 89K Protein 6e-88 51
int YP_008394266.1 integrase Not tested Not named Protein 3e-89 49