Gene Information

Name : CLS_07620 (CLS_07620)
Accession : YP_007848520.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 734377 - 735060 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :
ATGGAAATTTTGAAAGTACAGCAACTTTGCAAAACCTATGGCTCAGGTGAGGTCAAAGTAGACGCCCTGAAAAATGTCTC
CTTCTCTCTGGAGAAAGGACAATTTGCTGCGGTAGTCGGAGAATCCGGCTCCGGCAAAAGTACCCTGCTCAACTGTATCG
GTGCATTGGACACCCCCACATCCGGTACGATTCAGATTGATGGCCAGGATTTGTTTTCCATGAAGGAGGAAAAACGCACA
ATCTTCCGCCGCAGGAATATCGGCTTCATCTTCCAGTCCTTTCAGCTTGTCCCTGAACTGGACGTAGAGCAGAATATCAT
TTTCCCGCTTTTGCTGGATTATAAAAAACCAAACCCTTCAAAGGTGGAAGAAATTTTGGAAGTGCTGGGGCTTACGGCCC
GGCGGCATCACCTGCCAAGCCAGTTATCCGGCGGCCAACAGCAGCGGGTGGCCATTGGACGGGCGCTTATCACAAAGCCC
AAATTGATTTTGGCAGACGAGCCTACCGGCAACCTGGACAGCAAAAACAGCAGCGATGTGATCGCGCTGCTGACGCAGGC
ATCCCGTCGGTATCAGCAAACTATTTTGATGATTACGCACAATTCCAACCTGACGGCATCGGTTGACCGGGTGTTCCGGG
TAAGGGACGGTGTTTTGAAAGAGTTGGGAGGTGTGCAGCAGTGA

Protein sequence :
MEILKVQQLCKTYGSGEVKVDALKNVSFSLEKGQFAAVVGESGSGKSTLLNCIGALDTPTSGTIQIDGQDLFSMKEEKRT
IFRRRNIGFIFQSFQLVPELDVEQNIIFPLLLDYKKPNPSKVEEILEVLGLTARRHHLPSQLSGGQQQRVAIGRALITKP
KLILADEPTGNLDSKNSSDVIALLTQASRRYQQTILMITHNSNLTASVDRVFRVRDGVLKELGGVQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 44
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLS_07620 YP_007848520.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-74 68
CLS_07620 YP_007848520.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-52 53
CLS_07620 YP_007848520.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-41 43
CLS_07620 YP_007848520.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 3e-35 41