Gene Information

Name : CLS_06870 (CLS_06870)
Accession : YP_007848461.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 672368 - 673033 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence :

ATGCCTATTTTACAGACAACAGATTTGAAAAAATACTATGGGGACGAGCCGAACATTACAAAGGCTCTGGACGGCGTTTC
TCTCTCGGTAGAACACGGGGAATTTGTCGCCATCGTTGGCACATCCGGCAGCGGCAAGTCCACGCTGCTGAATATGATCG
GCGGTCTGGATGTTCCCACATCCGGCAAGGTCATTGTGGATGGCAAAGATTTATCTACTCTGAATGACGAGCAGCTTACC
ATTTTCCGCAGACGGAAAATCGGCTTTATCTTCCAAAACTACAACCTTGTCCCTGTCCTCAACGTCTATGAGAATATTGC
CTTGCCCGTGGAACTGGACGGCGACAAAGTAGATAAGAAATTCATGCAGGAAGTCGTTCGGATGCTGGCCTTGGAAGATA
AGCTGAATAATATGCCGAACAATCTTTCCGGCGGCCAGCAGCAGCGTGTCGCCATTGCCCGCGCCCTGATCTCAAAACCG
GCGATTGTGCTGGCGGACGAACCGACAGGCAACCTTGACAGCCGGACGAGTGATGATGTCCTCGGTCTGCTGAAAGTCAC
AAGCCAGAAGTTTCATCAAACGCTTGTCATGATTACCCATAACAACGAGATTGCCCAACTCGCAGATCGGATTATCCGTA
TTGAGGACGGGAAAATCATGGAGTGA

Protein sequence :

MPILQTTDLKKYYGDEPNITKALDGVSLSVEHGEFVAIVGTSGSGKSTLLNMIGGLDVPTSGKVIVDGKDLSTLNDEQLT
IFRRRKIGFIFQNYNLVPVLNVYENIALPVELDGDKVDKKFMQEVVRMLALEDKLNNMPNNLSGGQQQRVAIARALISKP
AIVLADEPTGNLDSRTSDDVLGLLKVTSQKFHQTLVMITHNNEIAQLADRIIRIEDGKIME

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-37	47
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-38	46
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	2e-38	46
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-38	46
Spaf_1862	YP_006310627.1	amino acid ABC transporter ATP-binding protein	Not tested	FWisland_2	Protein	7e-27	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CLS_06870	YP_007848461.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	5e-84	78
CLS_06870	YP_007848461.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	5e-61	57
CLS_06870	YP_007848461.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	1e-38	45
CLS_06870	YP_007848461.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	2e-33	43
CLS_06870	YP_007848461.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	8e-36	41