Gene Information

Name : CLS_04170 (CLS_04170)
Accession : YP_007848239.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 407572 - 408435 bp
Length : 864 bp
Strand : +
Note : -

DNA sequence :
ATGTTTGATGAGGTGGAGAAGTTTGTAGGATATCTGCGGGACGTAAAAAAAATGTCCCAGAATACGATTCTCTCGTACAG
GCGTGATTTGCTGCAGTTCGCATCCTATATGGCGGACAGGGGAGTGGCAGAGGCTGGAAAAGTTACAAAGACCAGCCTGG
ATTCCTACATTCTTTTTCTGGAGAGGGAGGGGAAGGCTGCCGCAACTATCTCGCGGATGCTGGCATCGATCAAGGCGTTT
TTTCATTATGAAAGCACAGAAGGATATATAAAAAGAAATCCGGCGGAGATGATCCGGGCGCCTAAAATCGAAAAGAAAGC
TCCGTCTATTCTCTCGGTAGAGGAGGTTACGAGACTTTTAAACCAGCCGGGCGGCAGAACCCCCAAGGAGATACGGGACA
AGGCTATGCTGGAGCTTCTCTACGCTACAGGAATCAGGGTTTCAGAGCTGATGAACCTGAATCTGCATCACATTAATATG
ACCATCGGCTTTATTACCTGCAGCGACAGCGGCAGGGAGAGAACGATCCCCTTTGGCCGCGTGGCGAAAAAAGCGCTGGA
TGATTACCTGAAAAATTCCAGGCCGGAGCTTACGAAAAAGAAAGAGTCAGACTGGCTGTTTGTAAACTGCAGCGGAGGAC
AGATGAGCCGTCAGGGCTTCTGGAAGATTATCAAATATTACGGGGAAAAGGCGGGGATCCAGACGGACATCACGCCTCAC
ACGCTGCGCCACTCCTTTGCCGCTCATCTGATCAGCAGCGGAGCAGACATGAAGGCAGTGCAGCAGATACTGGGACATTC
GGATATGGCCACTACTCAGATGTATGCTGCCTATCTGCATGGCTCACAGACAGCCAAGGAGTAG

Protein sequence :
MFDEVEKFVGYLRDVKKMSQNTILSYRRDLLQFASYMADRGVAEAGKVTKTSLDSYILFLEREGKAAATISRMLASIKAF
FHYESTEGYIKRNPAEMIRAPKIEKKAPSILSVEEVTRLLNQPGGRTPKEIRDKAMLELLYATGIRVSELMNLNLHHINM
TIGFITCSDSGRERTIPFGRVAKKALDDYLKNSRPELTKKKESDWLFVNCSGGQMSRQGFWKIIKYYGEKAGIQTDITPH
TLRHSFAAHLISSGADMKAVQQILGHSDMATTQMYAAYLHGSQTAKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-39 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-39 42