Gene Information

Name : CLS_38510 (CLS_38510)
Accession : YP_007850931.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Unknown
Product : ATPase components of various ABC-type transport systems, contain duplicated ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3693741 - 3695666 bp
Length : 1926 bp
Strand : +
Note : -

DNA sequence :
ATGCAGTCAGACGGGAAGGGCAGTTTGGAAAAAGGCAATGAAGGGCTGCCTCCGGTAACAGCAAAAATGCAGTTTAAAAA
AGCAGGTATGAACATGACAGAGTACAGAAAGACACAGACCAAAGCAGGCGGGAAGGACGGAAGCGAAAAGCAGATTCTCG
CTATGGTGAGGGATCTGTCAGTGGAATTTAATGACAACGGGCCGGAAACGGAGGTTGTGAAAGGAATCAGCTTCCCCATC
TATGAGGGGGAGATACTGGGAGTGGTGGGAGAGAGCGGATCCGGAAAATCCATGACAGCGCTTGCCATGATGGGACTTCT
GCCGGAGCGCGCGAAGGCAGAGAGAGGAAGCATAGAATTTTCCCAAAAGGATGGGGAGACGGTGGATCTGCTCAAGCTGT
CCCCAAAAGAGATGCAGAAGGTACAGGGCCGTGAAATTTCTATGGTGTTTCAGGAGCCGATGACCTCCTTAAATCCCGTC
ATGAAAATCGGAAGGCAGGTGGGGGAGAACCTGGAGCTGCATACAGAGCTTACAAGAGAGGAGATCCGGGAGAGGTCTGC
CCAGGCTCTGGAGCAGGTAGGCCTCTCAGAGCCAGAGGAGCTTTTGGAACGGTATCCCCATGAGCTGTCGGGAGGAATGC
GCCAGAGGGTTATGATTGCCCAGGCGATGATTGCCGCTCCCAGACTATTGATTGCAGATGAACCTACTACTGCTCTGGAT
GTTATTGTGCAGGCGCAGATTCTGAAACTGCTGCGCAGAATTCATGAGGAACAGAACACATCCATTCTCTTTATTTCCCA
TGATTTGAATGTAATCAGGGAGATCTGCGACCGTGTTCTCGTCATTTACAAGGGAGTGATAGTGGAGGAGGGGGAGGTCA
GCCAGGTGCTGAACCACCCTCAGCATGAATACACGAAACGCCTGGTGGCCTCTATCCCGCAGGCGGTCAGAGATACAGAA
AGCGGGAAGGAGATTCTGAATATCTCCCATCTGGACGTATTCTACAGGGAAGGGGGAGGGATTTTTAAGAAGCCTTCCAA
AAAGCATGTCCTCTGCGATGTCAATCTCACGGTGAAGGAGGGGGAGATACTGGGAATTGTCGGAGAGAGCGGCTGCGGAA
AATCCACTCTCTCAAAGACGATAGTCGGCCTCAACAGGGATTACTCCGGCGAGATTCATACAGAGGGGGAACTGCACCCG
CAGATGGTATTTCAGGATCCGTTCGGCTCCCTGAATCCTGCCAGGAAAATCGGGTGGATTCTCGAGGAGCCTCTGCGTCT
CAGGGGAATCCGCGACAGGAGCGAGAGGCGCAGGCTGGCTGAGGAAATGCTTGTAAAAATAGGGCTTGACGAGTCGTTCT
ACAGCAGGCGCCCCAGAGAGCTTTCGGGAGGTCAGAGACAGAGAATCAGCATCGGAGCGGCTCTGCTGGCCGATTCCAGG
CTGCTGGTAGCCGACGAGCCGGTGTCTGCCCTGGATGTAACAGTTCAGTCTCAGATTCTGAAACTGCTGCTGGATATTCA
CCAGGAGAGGAAAAATACTCTTCTGTTTGTGAGCCATGATCTGAACATTGTGCGCCGGATCTGCCACAGAGTAGCTGTCT
TGTATCTGGGAGAGGTTGTAGAATCTGGGGATGTAGAGGAAATATACAGAAATCCCTGCCATCCGTATACCAGGCTGCTG
CTGGAATCCTCTCTGGGTGGAGAGAAGGAGAAAGACAGGAAAGAGATGCATCTATCTTCTGATATCGGGGAAACCTTTGG
AAGAGAGAGCGCAGGCTGTCCTTTCTTCCCCAGATGCCCGAAGCGGACGAAGCAGTGTGAGAGCGCAAGGCCGGAGGTAA
TAAGGCTGGAAGACGCCCACGAGGTGAAATGCTTTCTGTTTGCGGAGGAGAAAACTTCTCCGGAGCAGGAGAGAGGAGAG
GCCTAG

Protein sequence :
MQSDGKGSLEKGNEGLPPVTAKMQFKKAGMNMTEYRKTQTKAGGKDGSEKQILAMVRDLSVEFNDNGPETEVVKGISFPI
YEGEILGVVGESGSGKSMTALAMMGLLPERAKAERGSIEFSQKDGETVDLLKLSPKEMQKVQGREISMVFQEPMTSLNPV
MKIGRQVGENLELHTELTREEIRERSAQALEQVGLSEPEELLERYPHELSGGMRQRVMIAQAMIAAPRLLIADEPTTALD
VIVQAQILKLLRRIHEEQNTSILFISHDLNVIREICDRVLVIYKGVIVEEGEVSQVLNHPQHEYTKRLVASIPQAVRDTE
SGKEILNISHLDVFYREGGGIFKKPSKKHVLCDVNLTVKEGEILGIVGESGCGKSTLSKTIVGLNRDYSGEIHTEGELHP
QMVFQDPFGSLNPARKIGWILEEPLRLRGIRDRSERRRLAEEMLVKIGLDESFYSRRPRELSGGQRQRISIGAALLADSR
LLVADEPVSALDVTVQSQILKLLLDIHQERKNTLLFVSHDLNIVRRICHRVAVLYLGEVVESGDVEEIYRNPCHPYTRLL
LESSLGGEKEKDRKEMHLSSDIGETFGRESAGCPFFPRCPKRTKQCESARPEVIRLEDAHEVKCFLFAEEKTSPEQERGE
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-78 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-78 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-78 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-78 43