Gene Information

Name : CLS_30340 (CLS_30340)
Accession : YP_007850315.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 2887695 - 2888459 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGAAGAAAGGTGCGCAAAGATGGACAGAGTACCGTTAATTGAACTGAGAAATATCTATAAAATCTATCAGATGGG
CAGCAAAGAGGTGAGAGCCAACGATGGGATCAGTCTGAACATTTACAGAGGAGAGTTTGTGGCGATCGTGGGGAAATCAG
GAAGCGGGAAATCCACTCTGATGAACATTATAGGAGCTCTCGATGTGCCTACAGAGGGGGAATATTTTCTGGGAGGGGAG
GACGTGTCACATATGAGTGACGATCAGCTGGCTGAGATAAGGAATAAAACCATAGGATTTATCTTCCAGCAGTACAACCT
GCTGCCAAAAGACAGCCTTCTGGAAAATGTGGAGCTGCCCCTCCTCTATGCCGGTGTCCCAAAGGAAGAGCGAAGACAGC
GGGCCATGCAGGCTCTTAGGCGGGTGGGACTGGAGGATAAGTGGAAGAACAGGCCGAAACAGCTTTCAGGAGGACAGCAG
CAGAGAGTATCCATCGCCAGAGCCCTGGCCGGGAACCCTTCTCTGATTCTGGCCGATGAGCCTACCGGTGCGCTGGACTC
AAGGACCAGCCGGGAAGTGCTGGATTTTCTGAAGGAGCTGAACCAGGAGGGAAATACTATTGTGATTATCACTCATGACA
GCTCTATCGCCCTGGAGGCTAAGCGGGTGGTGCGGATTAAAGACGGAAAAATAAATTTTGACGGGGATGTGAAAGAATAT
GCGGCAGTCCTTTCATCTGGCGATAAAAAGTATATGGAGCAATAA

Protein sequence : 
MAEERCAKMDRVPLIELRNIYKIYQMGSKEVRANDGISLNIYRGEFVAIVGKSGSGKSTLMNIIGALDVPTEGEYFLGGE
DVSHMSDDQLAEIRNKTIGFIFQQYNLLPKDSLLENVELPLLYAGVPKEERRQRAMQALRRVGLEDKWKNRPKQLSGGQQ
QRVSIARALAGNPSLILADEPTGALDSRTSREVLDFLKELNQEGNTIVIITHDSSIALEAKRVVRIKDGKINFDGDVKEY
AAVLSSGDKKYMEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-35 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLS_30340 YP_007850315.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 4e-56 53
CLS_30340 YP_007850315.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 6e-41 48
CLS_30340 YP_007850315.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 8e-40 46
CLS_30340 YP_007850315.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-42 46
CLS_30340 YP_007850315.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 4e-36 43
CLS_30340 YP_007850315.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 2e-30 42