Gene Information

Name : CLS_28360 (CLS_28360)
Accession : YP_007850155.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 2705058 - 2705945 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :

ATGGAAGAAGAGAGAGAGGCAGTCAGGCCTTCAGAGAAGGAAACGAGAAGTCCTGTCATTCAGGTAAGAAGGCTGTATAA
GATCTACCGGGTGGGCGAAACGAAGGTCCATGCCCTGAACGGGGTGGATTTTACGATGTACAAGGGAGAGTTCTGTGCCA
TTGTGGGGCCGTCCGGTTCGGGAAAGTCCACACTTTTAAATATGCTGGCAGGGCTTGAGAAGCCTACAAAGGGCGAGATT
GTGATAGCAGGAAAGCATATCGAGAAGATGAAGGAGGATCAGCTGGTAGCCTTCCGGCGGGAGCGGGTGGGCTTCATTTT
TCAGTCCTATAACCTTTTAGGCACCATGAACGCCATCGAGAATGTGGCTCTGCCTCTGGCCTTCCGCGGAATCGGAAAAA
AGGAGAGGATCCGCAAGGCACAGAAGTATCTGAAGCTGGTGGGGCTGTCACACGTATCCGATCATATGCCGAATCAGATG
TCGGGCGGGCAGCAGCAGAGAGTGGGAATTGCCAGGGCTCTGGCGGTAAAGCCGAAGATTATCTTTGCCGATGAGCCCAC
AGGAAACCTGGATTCCAAAACAACGATGGAAGTTTTAAAGCTGATGCAGAAAATTGTCCGGGAGCAGAACCAGACACTTG
TCATGGTTACCCATGACGATCACCTGGCCACCTATGCGGACAGGATTTTTCATATTATTGACGGAAAGATCGTGAAGATA
GAAACGATGGATCACAGCTCACAGGAGGCTGTAGGGGAAACCCGGCCGGATGAAGAAAAGACAGGGCCGCCGGATGACGG
GGAGGAAAACCTGGAGGCTGGAGAAAAACAGGAGAAGCAGCCGGACAGCACAGGGGAAGAGAAAAAAAACAGGGAGGACA
GAACATGA

Protein sequence :

MEEEREAVRPSEKETRSPVIQVRRLYKIYRVGETKVHALNGVDFTMYKGEFCAIVGPSGSGKSTLLNMLAGLEKPTKGEI
VIAGKHIEKMKEDQLVAFRRERVGFIFQSYNLLGTMNAIENVALPLAFRGIGKKERIRKAQKYLKLVGLSHVSDHMPNQM
SGGQQQRVGIARALAVKPKIIFADEPTGNLDSKTTMEVLKLMQKIVREQNQTLVMVTHDDHLATYADRIFHIIDGKIVKI
ETMDHSSQEAVGETRPDEEKTGPPDDGEENLEAGEKQEKQPDSTGEEKKNREDRT

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-35	46
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-35	46
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	1e-35	46

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CLS_28360	YP_007850155.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	2e-46	48
CLS_28360	YP_007850155.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	2e-43	46
CLS_28360	YP_007850155.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	1e-38	43
CLS_28360	YP_007850155.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	1e-45	43
CLS_28360	YP_007850155.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	3e-35	42