Gene Information

Name : CLS_22760 (CLS_22760)
Accession : YP_007849708.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2182791 - 2185310 bp
Length : 2520 bp
Strand : +
Note : -

DNA sequence :
ATGATAGATCGCTTTACAGAAAAGGCCAGGGAGGCAATTCGCCTGGCAGTGGAGACAGCGGGAGAGCTGGAACACGGCTA
TGTGGGAACAGAGCACCTGCTTCTTGGTCTGCTCCGGGAGGGCACAGGAGTGGCTTCCATGATTCTGGAGCACTATGGTG
TGACGGAGGAGAAGGTTCTCGCCCTGATGGAGCGGCTGATCTCGCCGGCAGCTCCAACCAGGCTGAAGGGGGAGCTGGAA
TATACGCCAGGGGCAAGGAGGACGCTGGAGGCAAGCTACGAAGAGGCAGTTCTCTTTAAGGCACCGCTTATCGGCACGGA
GCATATCCTGATTGCCATGATTAAAAATGGAAAGTGCACGGCTGCCAGGCTCTTAAATACCATGAATGTCAATATCCAGA
AGCTGTATGTAGATCTGCTTTCCGCTATGGGAGACGACGCCCCGGCAGGAAAAGAAGAGCTGGCAGGAAAGGCGAAAAGA
GAGAAGGGGGATACTCCGAATCTGGATCATTTCAGCAGAGATCTGACCCAGATGGCCAGGGAAGGCAGGCTTGATCCGGT
GATCGGCCGTGAGACAGAGATGCGGCGTGTAGTCCAGATCCTGAGCAGGCGCACGAAGAACAATCCCTGCCTGATCGGTG
AGCCGGGAGTGGGAAAGACGGCAGTGGTAGAGGGGCTTGCCCAGCTGATCGTGAGCGGGGATGTGCCGGAAACCATCGCC
GGAAAGCGGGTAGTGAGTCTTGATCTGTCAGGGATGGTGGCTGGAAGCAAGTACAGAGGAGAGTTTGAGGAGAGAATTAA
AAAGGTGCTTTCCGAAATCAGGGAAGATGGGAACATCCTGCTCTTTATCGACGAGATCCACACGATCATCGGTGCCGGAG
GGGCGGAAGGCGCTATAGATGCCTCCAACATTCTGAAGCCCTCCCTGGCAAGAGGAGAGCTGCAGCTCATCGGCGCCACA
ACTGTGGAGGAGTACCGTAAGTATATTGAAAAGGATGCCGCTCTTGAGAGAAGGTTCCAGCCGGTTATGGTGGAGGAGCC
CACCGAGGAGGAGTCCTTTGCGATTCTGAGAGGACTGCGCGGCCACTATGAGGAGCATCACAAGGTGGAGATCACAGATG
AAGCCCTCAGAGCCGCTGTCAGGCTGGCCGCCAGGTATATCAATGACAGATTCCTCCCGGACAAGGCGATCGATCTGATC
GACGAGGCAGCCTCCAAGATCCGGCTGACTGTTTACACAGAACCGGAGGAGATTAAAAATCTGGAGGAAGAAGTCAAAAA
GCTGGAGGATGAGAAGGAAAACGCTATTCGGGAGGAGGCCTACGAGAAGGCAGGGGAGATAAAGAAGGAGCAGAGCAGCA
GGCTGGAACAGATTGAGAAGCTCCGAGAAAAATGGCAGGAGGAAAAGAGCCAGAGAAAGCTGGTTGTGGGAGAAAATGAG
ATAGCCGATGTGGTTTCTGAGTGGACAAAAATCCCTGTCAGAAAGCTGTCTGAGGGCGAGTCAGAAAGGCTTCTGAAACT
GGAGTCTGTGCTTCACGAGCGCGTGGTAGGCCAGGAGGAGGCAGTGGCAGCCGTGGCCAAGGCTATCCGAAGAGGCAGAG
TGGGACTCAAGGATCCAAAGAGGCCTATTGGCTCCTTCCTGTTTCTCGGGCCTACTGGAGTGGGAAAGACAGAGCTGTCC
AAGGCGCTGTGCGAGGCTATGTTTGGAACAGAGCATGCCATGATCCGCGTGGACATGTCGGAGTACATGGAAAAGCACAG
TGTATCCAGGATGATCGGCTCTCCGCCAGGCTATGTCGGCTACGATGAGGGCGGGCAGCTCAGTGAAAAGGTGAGGAGAA
ATCCTTACTCTGTGATCCTCTTTGATGAGATTGAAAAGGCACACCCGGATGTATTCAATATTCTTCTGCAGATACTCGAC
GACGGTCACATCACCGACGCCCAGGGCAGGAAAATTGACTTTAAGAATACGATTCTCATTATGACCTCTAATGCAGGGGC
GCAGAATATTATTTCTCCGAAGCGGCTGGGCTTTGCGTCGGAAAATGACGAGAAGGCCAATTATGAATTTATGAAGGAGC
GGGTGATGGAGGAGGTAAAGCGCCTGTTTAAGCCGGAGTTTTTAAACAGGATCGATGACATTACCGTATTCCATCCGCTC
AGCAGAGAAAATATCAGGGCTATCGCCGCAATTATGGTGGCCTCCATCGCCAAGAGAACGAAGGAGCAGATGAACATTGC
TCTTACAGTGGACAGCAGTGCCAGAGATTACCTGGCCGAAAAGGGATATGACGAGAAGTACGGCGCAAGGCCTCTCAGGA
GGACGATTCAGACCCTGATTGAAGACAGGCTGTCCGAGGAAATTCTCTCAGGTACTTTTAAGAGCGGGGATGAGGTGACG
GTGAAGAAGGGGAAAGACGGACTTATTTTTTCCAAAAAGTCCCGGACGGGCAGAAAAGGACGGACACCGGCCGCAGAGAA
GAAGGCTGAACAGCTGCAGCAGATATCTGAGTCTAATTAG

Protein sequence :
MIDRFTEKAREAIRLAVETAGELEHGYVGTEHLLLGLLREGTGVASMILEHYGVTEEKVLALMERLISPAAPTRLKGELE
YTPGARRTLEASYEEAVLFKAPLIGTEHILIAMIKNGKCTAARLLNTMNVNIQKLYVDLLSAMGDDAPAGKEELAGKAKR
EKGDTPNLDHFSRDLTQMAREGRLDPVIGRETEMRRVVQILSRRTKNNPCLIGEPGVGKTAVVEGLAQLIVSGDVPETIA
GKRVVSLDLSGMVAGSKYRGEFEERIKKVLSEIREDGNILLFIDEIHTIIGAGGAEGAIDASNILKPSLARGELQLIGAT
TVEEYRKYIEKDAALERRFQPVMVEEPTEEESFAILRGLRGHYEEHHKVEITDEALRAAVRLAARYINDRFLPDKAIDLI
DEAASKIRLTVYTEPEEIKNLEEEVKKLEDEKENAIREEAYEKAGEIKKEQSSRLEQIEKLREKWQEEKSQRKLVVGENE
IADVVSEWTKIPVRKLSEGESERLLKLESVLHERVVGQEEAVAAVAKAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELS
KALCEAMFGTEHAMIRVDMSEYMEKHSVSRMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQILD
DGHITDAQGRKIDFKNTILIMTSNAGAQNIISPKRLGFASENDEKANYEFMKERVMEEVKRLFKPEFLNRIDDITVFHPL
SRENIRAIAAIMVASIAKRTKEQMNIALTVDSSARDYLAEKGYDEKYGARPLRRTIQTLIEDRLSEEILSGTFKSGDEVT
VKKGKDGLIFSKKSRTGRKGRTPAAEKKAEQLQQISESN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-178 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLS_22760 YP_007849708.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 55
CLS_22760 YP_007849708.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 5e-134 50