Gene Information

Name : CLS_21920 (CLS_21920)
Accession : YP_007849641.1
Strain : Clostridium saccharolyticum K10
Genome accession: NC_021047
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2112466 - 2113161 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence :
ATGGAGATTTTAAGAGTTGAAAATTTGTGTAAAACTTATGGAAAAGGCGAAGCAGAAGTTCAAGCCTTGAAGAATGTGTC
CTTTTCCCTTGAAAAAGGGGAATTTGCTGCTGTTATAGGCGAATCTGGTTCTGGAAAAAGTACCTTGCTTAACTGTATCG
GTGCCTTAGATACACCGACTTCTGGTTCCATTTTTATCGACGGACAAAACCTGTTTTCCATGAAAGAAGAAAAACGAACA
ATTTACAGACGACGAAATATCGGTTTTATCTTCCAGTCTTTTCAGCTTGTATCTGAGTTGAATGTAGAGCAGAATATTGT
GTTCCCGCTGTTGCTGGACTACCGAGAGCCAGACCAGAAAAGGGTAAATGAAATTCTTGATTTGCTTGGACTGACCGAAC
GCCGCAAGCATTTACCGAGCCAGTTATCCGGAGGACAGCAGCAACGAGTAGCTATTGGAAGGGCATTGATAACACAGCCA
AAACTAATTTTAGCAGATGAACCGACAGGAAACCTAGACAGCAAAAATAGCCAGGACGTTATGGATATGCTGACAACGGC
TTCTCGGCATTATCAGCAGACGATTTTAATTATTACACATAATAAGAATTTAACAGCTTCCGTAGATAGAGTATTTCAAG
TAAGTGACGGTGTTCTTACAGATTTAGGAGGGATTGCAAATGAAACATTATCTTGA

Protein sequence :
MEILRVENLCKTYGKGEAEVQALKNVSFSLEKGEFAAVIGESGSGKSTLLNCIGALDTPTSGSIFIDGQNLFSMKEEKRT
IYRRRNIGFIFQSFQLVSELNVEQNIVFPLLLDYREPDQKRVNEILDLLGLTERRKHLPSQLSGGQQQRVAIGRALITQP
KLILADEPTGNLDSKNSQDVMDMLTTASRHYQQTILIITHNKNLTASVDRVFQVSDGVLTDLGGIANETLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-38 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLS_21920 YP_007849641.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 4e-75 68
CLS_21920 YP_007849641.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-51 54
CLS_21920 YP_007849641.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 4e-42 44
CLS_21920 YP_007849641.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 5e-38 42
CLS_21920 YP_007849641.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 8e-36 41