Gene Information

Name : ENC_08960 (ENC_08960)
Accession : YP_007844907.1
Strain : Enterobacter cloacae NCTC 9394
Genome accession: NC_021046
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 941760 - 944405 bp
Length : 2646 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAATCCAGCCATCCTGTTACGCCGTCTTAACCCTTACTGTGCCCGCGCAATGGAAGGGGCCGCTTCCCTGTGCCA
GACCCGCGCCCATGCGGAAATCCTGCCTGAGCACTGGCTGCTGAAACTGCTGGAACAGGGTGAGGGCGACCTGACGGTGC
TGGCGCGGCGCTACGAATGGGATATGGATACGATATGGCAGGATATGCTGGGTTTTCTGGACAGCCTGCCACGGTCGGTG
CGCAGCCGTCCGCAGCTTTCGGAGGGCGTGAAGTCCCTTATGCAGGACGCCTGGCTGCACGCCTCGCTGTCGGGGGAAGA
GCACATCCGCAGCATTCACCTCCTGATGGCTCTGGTGGAAAAACCGAAACTGCTGCGCTGCGACGGCCTGTGGCCGCTGC
TGACGCTGGCGCAGAGCCAGCTTGAGCGCCTGCGTGGACTTCTGGATGCGCAGTCGGATGAACGACCGGAGGTGCAGCAG
GAAGCGGAGCTTACGCAGGGGGATGAGGTGGAGTTTGTCGGCCGTCCGGTGAATGCGGATATAACAGGAGAGCTGAACCC
GGCGTTGCAGAATGCGCTGGACAGGTTCACCCTCGACGTCACCGCCCGCGCCCGTGAGGGCAGAATCGACCCGGTCTATG
GCCGCGACAATGAAATCCGCCAGATGGTGGACATTCTTTCCCGGCGCCGCAAGAACAACCCGATTCTGGTCGGCGAACCG
GGCGTCGGCAAGACCGCGCTCGTGGAAGGACTGGCGCTGCGCATTCATGAGGGCAATGTGCCGGACGCGCTGAAGCCGGT
CTCCGTGCGCACCCTTGACCTCGGCCTGTTACAGGCCGGGGCGGGTGTGAAGGGGGAATTCGAGCAGCGCCTGAAAAACA
TCATCGACGCGGTGCAGCAGTCACCCCTGCCGGTTCTGCTCTTCATTGACGAGGCGCACACCATTATCGGCGCGGGCAAC
CAGGCGGGCGGCGCCGATGCGGCCAACCTGCTGAAACCGGCGCTGGCCCGCGGTGAGCTCAGAACCATTGCCGCCACCAC
CTGGAGCGAATACAAACAGTACTTTGAGCGCGACGCCGCGCTGGAGCGTCGTTTCCAGATGGTTAAAGTTGATGAACCGG
ACGACGACACCGCCTGCCTGATGCTGCGCGGACTCAAGTCACGCTACGCGGAGCACCATGGCGTGCATATTACCGATAAG
GCAGTTAAAGCCGCCGTCACGCTCTCCAGACGCTATCTGACCGGACGCCAGCTTCCGGACAAGGCGGTGGATTTGCTGGA
TACCGCCTCTGCCCGTGTCCGTATGAGCCTGGACACTATTCCAGAGCCGCTGACCCGCATGAAGGCGCAGCTCACGGCCC
TTGCTATGGAGAAGCAGGCGCTGCTGGAGGATATCGCGGTGGGCAATACCGCCCACGGCGAACGTCTGGCCGCCATCGGA
GAGGAAGAAGTCGCCATCATTTTGCAGCTCGACGAACGGGAAACCCGGTACGGCCAGGAGCTGAAACTGACGGAAGAACT
GCTTGCCTGCCGCACGGATATCTCCCGTCAGGGGGAGATTGCGGACCTTCAGATGCAGCTTACTGCCGTGCAGCAGAATA
CCCCGCTGCTGGGGCTGGATGTGGACGCGCGTACCGTCGCCACCGTTATCGCCGACTGGACGGGCGTACCGCTCTCTTCC
CTGATGAAGGACGAGCAGACGGAACTGCTGAGCCTTGAGCACAGTCTGGCGAAACGCGTTGTCGGTCAGGACAGTGCGCT
GAATGCCATTGCGCAACGCCTGCGCGCCAGCAAAACCGGTCTGGCGCCTGAGAACGGCCCGCAGGGCGTGTTCCTGCTTG
TGGGGCCGAGCGGCACCGGCAAGACCGAAACCGCACTGGCGCTGGCCGATGAACTGTTCGGCGGCGAGAAGTCCCTTATC
ACCATCAACCTTTCGGAATACCAGGAGCCACACACCGTTTCGCAGCTCAAGGGCTCACCTCCGGGCTACGTGGGTTACGG
TCAGGGCGGCATTCTGACCGAAGCCGTCCGTAAGCGCCCGTACAGCGTGGTGCTGCTGGATGAAGTGGAAAAGGCGCACC
GGGACGTGATGAACCTGTTCTACCAGGTGTTTGACCGGGGCGTCATGCGCGACGGCGAGGGGCGGGAAATTGACTTCCGC
AACACGGTGATTCTGATGACCTCCAATCTCGGCAGCGACCTTATCATGCAGCTGCTGGATGAACAGCCGGAGGCGACAGA
GCCGGACCTGCATGAACTGCTGCGTCCTGTCCTGCGGGACCACTTCCAGCCCGCGCTGCTGGCGCGCTTCCAGACGGTGA
TTTACCGTCCGTTGGCAAAGGCAGCGATGCGTACCATTGTGGAGATGAAGCTGGCGCAGGTCAGTAAACGCCTCAACCGT
CACTACGGTATGAAGACCGATATCCACGAAAGCCTGTACGACGCGCTGACCGATGCCTGCCTGCTGCCGGACACCGGGGC
ACGCAATGTTGACAGCCTGCTGAACCAGCAGATTCTGCCGGTGCTGAGCCAGCAACTGCTGATGCATATGGCCGCGAAAC
AGAAGTCGCATACCCTGACGCTCGGCTGGGATGAGGAAGAGGGCATAGTGCTCGAGTTTGACCGGACACAAGGAGTGCAC
GCATGA

Protein sequence :
MENPAILLRRLNPYCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDTIWQDMLGFLDSLPRSV
RSRPQLSEGVKSLMQDAWLHASLSGEEHIRSIHLLMALVEKPKLLRCDGLWPLLTLAQSQLERLRGLLDAQSDERPEVQQ
EAELTQGDEVEFVGRPVNADITGELNPALQNALDRFTLDVTARAREGRIDPVYGRDNEIRQMVDILSRRRKNNPILVGEP
GVGKTALVEGLALRIHEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIDAVQQSPLPVLLFIDEAHTIIGAGN
QAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKSRYAEHHGVHITDK
AVKAAVTLSRRYLTGRQLPDKAVDLLDTASARVRMSLDTIPEPLTRMKAQLTALAMEKQALLEDIAVGNTAHGERLAAIG
EEEVAIILQLDERETRYGQELKLTEELLACRTDISRQGEIADLQMQLTAVQQNTPLLGLDVDARTVATVIADWTGVPLSS
LMKDEQTELLSLEHSLAKRVVGQDSALNAIAQRLRASKTGLAPENGPQGVFLLVGPSGTGKTETALALADELFGGEKSLI
TINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGVMRDGEGREIDFR
NTVILMTSNLGSDLIMQLLDEQPEATEPDLHELLRPVLRDHFQPALLARFQTVIYRPLAKAAMRTIVEMKLAQVSKRLNR
HYGMKTDIHESLYDALTDACLLPDTGARNVDSLLNQQILPVLSQQLLMHMAAKQKSHTLTLGWDEEEGIVLEFDRTQGVH
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-150 44
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-112 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 7e-112 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ENC_08960 YP_007844907.1 type VI secretion ATPase, ClpV1 family VFG2076 Protein 2e-167 45
ENC_08960 YP_007844907.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 2e-137 43
ENC_08960 YP_007844907.1 type VI secretion ATPase, ClpV1 family VFG0079 Protein 5e-112 42