Gene Information

Name : ENC_42160 (ENC_42160)
Accession : YP_007847461.1
Strain : Enterobacter cloacae NCTC 9394
Genome accession: NC_021046
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4299544 - 4300281 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence :

ATGCGCCGTTTGTTATTCCTTACGCTGACAGGCCTGGGCCTGTTCGCGCCCTCTGTGTATGCGCAACTGCCGGGGCTGGT
TTCCACGCCGCTGGCGAACGGGGGGCAAAGCTGGTCCCTGTCCGTGCAGACGCTGGTATTCATCACCTCGCTGACCTTTA
TCCCGGCGATCCTGCTGATGATGACCAGCTTCACCCGCATCATCATTGTGTTTGGCCTGCTGCGCAACGCGCTCGGCACG
CCGTCCGCGCCGCCTAATCAGGTGCTGCTGGGTTTAGCCCTGTTCCTGACCTTTTTCATTATGTCGCCGGTGATCGACAA
GATTTACACCGAGGCCTACCAGCCGTTCAGCGAAGATAAAATTTCCATGCAGGTTGCCCTGGAAAAGGGCGCGCAGCCAT
TACGTGAATTTATGCTTCGCCAGACGCGCGAAGCGGATCTGGCCCTGTTTGCCCGTCTCGCTAACACCGGTGAGTTACAG
GGGCCGGAAGCGGTGCCGATGCGCATTCTGCTCCCGGCGTATGTGACCAGTGAGCTGAAAACGGCGTTCCAGATCGGCTT
CACCATTTTCATTCCGTTCCTGATTATTGACCTGGTGATCGCCAGCGTCCTGATGGCGCTAGGGATGATGATGGTCCCGC
CCGCAACCATTGCCCTGCCCTTTAAGATCATGCTGTTCGTGCTGGTCGACGGCTGGCAGCTGCTGGTCAGCTCGCTGGCG
CAGAGTTTCTACAGTTGA

Protein sequence :

MRRLLFLTLTGLGLFAPSVYAQLPGLVSTPLANGGQSWSLSVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLALFLTFFIMSPVIDKIYTEAYQPFSEDKISMQVALEKGAQPLREFMLRQTREADLALFARLANTGELQ
GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKIMLFVLVDGWQLLVSSLA
QSFYS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ECs4583	NP_312610.1	type III secretion system protein	Virulence	LEE	Protein	2e-30	44
escR	AFO66317.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	4e-29	43
escR	AFO66400.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	4e-29	43
escR	AAK26700.1	EscR	Virulence	LEE	Protein	3e-31	43
escR	AAL57527.1	EscR	Virulence	LEE	Protein	3e-31	43
escR	CAC81847.1	EscR protein	Virulence	LEE II	Protein	3e-31	43
escR	CAI43889.1	EscR protein	Virulence	LEE	Protein	3e-31	43
escR	YP_003223490.1	T3SS structure protein EscR	Virulence	LEE	Protein	4e-31	43
escR	AAC31528.1	L0049	Virulence	LEE	Protein	3e-31	43
escR	YP_003232138.1	type III secretion system protein	Virulence	LEE	Protein	4e-31	43
escR	ACU09473.1	type III secretion system protein EscR	Virulence	LEE	Protein	3e-31	43
escR	YP_003236103.1	T3SS structure protein EscR	Virulence	LEE	Protein	4e-31	43
escR	NP_290283.1	type III secretion system protein	Virulence	LEE	Protein	4e-31	43
hrcR	AAT96262.1	HrcR	Virulence	S-PAI	Protein	7e-26	42
hrcR	AAT96303.1	HrcR	Virulence	S-PAI	Protein	7e-26	42
hrcR	AAT96343.1	HrcR	Virulence	S-PAI	Protein	7e-26	42
escR	AAC38369.1	EscR	Virulence	LEE	Protein	2e-30	42
hrcR	ABA47279.1	HrcR	Virulence	S-PAI	Protein	2e-27	41
lscR	AAO18040.1	LscR	Virulence	TTSS locus	Protein	3e-30	41
unnamed	AAL06354.1	EscR	Virulence	LEE	Protein	4e-30	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG2338	Protein	4e-91	85
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG2494	Protein	4e-74	67
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG1259	Protein	2e-65	60
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG2016	Protein	2e-59	55
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG0188	Protein	6e-34	43
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG0827	Protein	2e-31	43
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG0044	Protein	8e-34	42
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG0715	Protein	1e-30	42
ENC_42160	YP_007847461.1	flagellar biosynthetic protein FliP	VFG0394	Protein	7e-31	41