Gene Information

Name : ENC_18330 (ENC_18330)
Accession : YP_007845611.1
Strain : Enterobacter cloacae NCTC 9394
Genome accession: NC_021046
Putative virulence/resistance : Virulence
Product : general secretion pathway protein D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1874897 - 1876813 bp
Length : 1917 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAATTTCCCTGGGCGTGCGTGGCGCTGACCGCATTGTCGTTATATTCCAGTTCGCTGCTTGCAGCTAACTTTAG
CGCAAGTTTTAAAAATACTGATATTCGCGAGTTTATCGATACGGTAGGTCGCAATCTCAACAAAACTATTCTGGTCGATC
CGTCCGTCCAGGGAACCGTCTCGGTCAGAACCTACAACGTGCTGACGGAGGATGAGTATTACCAGTTCTTCCTGAGCGTG
CTGGATCTCTACGGCCTGTCGGTGATCCCGATGGACAACGGCATGGTCAAAGTGGTGCGCTCAAGCGTAGCGCGTACCGC
CGGTGCGCCGCTGGCAGACAGCAAGAACCCGGGCAAAGGTGACGAGATTATCACCCGCGTGGTGCGTATGGAAAACGTAC
CCGTTCGCGAGCTGGCCCCGCTGCTGCGTCAGCTCAACGATGCCACCGGCATCGGGAATGTGGTCCACTTTGAGCCGTCC
AACGTCCTGCTGTTAACCGGTAAAGCCTCGGTGGTGAACCGCCTGGTGGATCTGGTTCAGCGCGTCGATAAAGACGGTAT
TCAGCGCCGCGAAATCATCCCGCTGCGCTTTGCCTCTGCCAAAGAGCTTTCGGATATGTTGAATAACCTCAACAACGAAG
AGCAGAAGGGGCAGAATGCGCCGCAGCTGGCGACCAAGGTGGTGGCGGATGACGAAACCAATAGCCTGGTGATCAGCGGC
TCGGAAGATGCGCGCGCGCGTACCCGTTCCCTTATCCATCAGCTGGATCGCGAGCAGAATAACGAGGGGAACACCCGCGT
CTTCTACCTCAAATATGCCAGCGCCACCAAAGTGGTACCGGTGCTGACGGGGATTGGCGAGCAGCTGAAAGACAAGCCGG
GCGCGGCCAAAGCGAAAACCGCGAGCGCCTCAACCGACCTGAATATTACCGCCGACGAGTCGACCAACTCCCTGGTGATC
ACCGCGCAGCCTAACGTGATGAACTCCCTGGAGAAGGTGATCGACAAGCTGGATATTCGCCGTCCGCAGGTGCTGGTGGA
AGCGATCATTGCCGAAGTGCAGGACGGCAACGGCCTGGATCTTGGCGTGCAGTGGACCAGCAAGCACGGCGGCGTGCAGT
TTGGCGCTACCGGCCTGCCAATCAGCCAGATTAAAAATGGCACCATGAAAGGGGCGAGCTTCACGGGCCTTGCGACCGGC
TTCTTTAACGGTGATTTCGGTGCGCTGGTGACCGCGCTCTCCACCGACGGTAAAAACGACATCCTCTCCACGCCAAGCGT
GGTCACGCTGGATAATAAAGAAGCGTCGTTCAACGTCGGTCAGGATGTGCCGGTGCTTTCCGGTTCGCAAACCACCAGCG
GCGACAACGTCTTTAACTCGGTTGAGCGTAAAACCGTGGGGACCAAGCTGAAGATTGTGCCGCAAATCAACGATGGCGAC
ATGATCCACCTGAAGATTGAGCAGGAAGTATCCAGCGTCGACAACAGCGCAACGGAAGATTCCAGCCTCGGCCCAACCTT
CAACACGCGCACGATCAATAACGAAGTGATGGTCCACAGTGGCCAGACGGTGGTGCTCGGCGGCCTGATGGAAAATGTGA
CCAAACAGTCGGTCTCCAAAGTGCCGCTGCTCGGCGATATCCCGCTGGTCGGGCAGCTGTTCCGCTACACCTCGCAGGAT
ACTTCCAAACGCAACCTGATGGTGTTTATTCATACCACCGTCCTGCGTGACGACGACAACTACAGCGCAGCCTCGAAAGA
GAAATATGATCAGATCCGGGTGCGCCAGATGCAGCGCGTGGAAGAGAAAAAGCTCGGTATTGTCGAGCCGAGCGACAACG
CCGTACTGCCAGCGTTTCCTGCCGCCAGCACTGCACCCGTGAAAACCCACGCGGCACGCAATCCGTTTAAAGAGTAA

Protein sequence :
MKKFPWACVALTALSLYSSSLLAANFSASFKNTDIREFIDTVGRNLNKTILVDPSVQGTVSVRTYNVLTEDEYYQFFLSV
LDLYGLSVIPMDNGMVKVVRSSVARTAGAPLADSKNPGKGDEIITRVVRMENVPVRELAPLLRQLNDATGIGNVVHFEPS
NVLLLTGKASVVNRLVDLVQRVDKDGIQRREIIPLRFASAKELSDMLNNLNNEEQKGQNAPQLATKVVADDETNSLVISG
SEDARARTRSLIHQLDREQNNEGNTRVFYLKYASATKVVPVLTGIGEQLKDKPGAAKAKTASASTDLNITADESTNSLVI
TAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDGNGLDLGVQWTSKHGGVQFGATGLPISQIKNGTMKGASFTGLATG
FFNGDFGALVTALSTDGKNDILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTSGDNVFNSVERKTVGTKLKIVPQINDGD
MIHLKIEQEVSSVDNSATEDSSLGPTFNTRTINNEVMVHSGQTVVLGGLMENVTKQSVSKVPLLGDIPLVGQLFRYTSQD
TSKRNLMVFIHTTVLRDDDNYSAASKEKYDQIRVRQMQRVEEKKLGIVEPSDNAVLPAFPAASTAPVKTHAARNPFKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspD CAE85234.1 GspD, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-118 44
gspD YP_854407.1 type II secretion protein GspD Not tested PAI I APEC-O1 Protein 2e-125 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ENC_18330 YP_007845611.1 general secretion pathway protein D VFG2047 Protein 1e-116 44