Gene Information

Name : ROI_08020 (ROI_08020)
Accession : YP_007831079.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Virulence
Product : Glycosyltransferases involved in cell wall biogenesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 800453 - 801430 bp
Length : 978 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGGCAGTCTTATATATGGTAATTCCGTGTTATAATGAGGAAGAAGTTTTACCGGTAACTTCTGGTCTGTTTTTAGA
GGAATTACAGTTGCTGATCGAAAAAGAAAAGATAAGTGAAGAGAGCCGCATCCTTTTTGTCAATGACGGGAGTAAGGACC
GAACATGGGAGATTATAGAAGAGCTTGCCAGGGAGAATCCACACTTTATTGGAATCTGTCAGAGCCGCAACAGAGGACAT
CAGAATGCAGTCCTTGCAGGACTGATGGAGGCAAAAGATGTCAGTGACATTACGATATCGATCGATTGTGACGGGCAGGA
TGATATCGCAACGATGGAAGCGATGGTGGATGCTTACTATGACGGGGCGGAAGTGGTCTATGGTGTCAGAAGCAGCCGTG
ATACGGATACCTTCTTTAAGCGATTTACGGCACAGGCTTTTTATAAGGTCTTAATGCGGATGGGGGTGGAAACCGTTTAT
AATCATGCAGATTACCGGCTGATATCGGCGAGGGTATTAAAGGAATTTGCAGGTTTTAAAGAGGTAAATTTATTTCTGCG
CGGGATGATCCCGCTGGTTGGATTCAAGAGTACGAGTGTTTTTTATGAGAGGCATGAGAGGATCGCAGGGGAATCGCATT
ATCCGCTCGCAAAGATGGTCAATCTGGCGATTGACGGGATCACGAGCTTAAGTGTAAAACCGCTCCGTCTTATTTCAGGT
CTTGGAATTGGCGTGTCTGTGTTAAGTTTTGTTGGAGTTTTATGGGCCGTTATTACACAGATCTGCGGCAGAACGGTGAC
CGGATGGGCAAGTACCGTCTGTGTGATCTGTTTTATGGGAGGTGTACAGCTTGTCTGTCTTGGCGTGCTGGGCGAATATA
TTGGAAAAATTTACATGGAAGTCAAGGCAAGGCCGCGCTATATCATCAGCGAGCGTACCTGGACGAAACAAAATGAGGAT
GAAGAAAAAGGAGAATAG

Protein sequence : 
MKAVLYMVIPCYNEEEVLPVTSGLFLEELQLLIEKEKISEESRILFVNDGSKDRTWEIIEELARENPHFIGICQSRNRGH
QNAVLAGLMEAKDVSDITISIDCDGQDDIATMEAMVDAYYDGAEVVYGVRSSRDTDTFFKRFTAQAFYKVLMRMGVETVY
NHADYRLISARVLKEFAGFKEVNLFLRGMIPLVGFKSTSVFYERHERIAGESHYPLAKMVNLAIDGITSLSVKPLRLISG
LGIGVSVLSFVGVLWAVITQICGRTVTGWASTVCVICFMGGVQLVCLGVLGEYIGKIYMEVKARPRYIISERTWTKQNED
EEKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROI_08020 YP_007831079.1 Glycosyltransferases involved in cell wall biogenesis VFG0670 Protein 4e-29 42