Gene Information

Name : ROI_06060 (ROI_06060)
Accession : YP_007830913.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Resistance
Product : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 593946 - 594608 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAAATACTGGCAGTTGATGATGAACCGGCAATTTTGGAAATGATAGAAAGCATTTTGAATAAGGATGGACATCT
GGTTACCAAAGTAAGTAATCCACTAAAAATTAATATGGAAGAATTACATCGTTATGACCTGATTTTACTGGACATTATGA
TGCCTGGAATTGATGGCTTCGAATTATGCAAAAGAATCAGGGCACTTGTGGATTGTCCGATTTTGTTTCTTACGGCAAAA
ACGGAGGAAAACAGTCTGGTAAACGGACTTTCTTTAGGAGCAGATGATTATATTTCAAAGCCATTTGGAGTGATGGAACT
TCGGGCAAGGATCAATGCACATCTTAGAAGAGAGCACAGGGAACATTCTGTCCGGATGGTTTTGGGGAGGGTCTGTATTC
AAATATCTCAAAAGAAACTATTGGTTGATGATAAGGAACTTCCTCTTACGAAAGCGGAGTACGAAATTTGTGAATTCCTG
GCTAAAAACAGGGGACAGGTTTTCTCGAAAGAACAGATTTTAGAAGAGGTCTTTGGTTTTGACAGTGAGAGTAATGACAG
TACCATTATCACGCATATCAAAAATATAAGAGCAAAATTTGCGGATTATGATTATACACCGATAAAAACAGTCTGGGGGA
TTGGATATAAATGGGAAGAGTAA

Protein sequence :
MAKILAVDDEPAILEMIESILNKDGHLVTKVSNPLKINMEELHRYDLILLDIMMPGIDGFELCKRIRALVDCPILFLTAK
TEENSLVNGLSLGADDYISKPFGVMELRARINAHLRREHREHSVRMVLGRVCIQISQKKLLVDDKELPLTKAEYEICEFL
AKNRGQVFSKEQILEEVFGFDSESNDSTIITHIKNIRAKFADYDYTPIKTVWGIGYKWEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROI_06060 YP_007830913.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain AF310956.2.orf0.gene Protein 7e-26 41