Gene Information

Name : ROI_06030 (ROI_06030)
Accession : YP_007830910.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Virulence
Product : ABC-type multidrug transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 591752 - 592465 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
ATGGAAATGATGTTGCAGACACAAAATTTGTGTAAATATTTTAGAAAGCAGAAAGCGGTAAATAATGTTTCACTTAATAT
AGAAAAGGACCAGATTTACGGACTGCTTGGACCGAATGGTGCGGGAAAATCTACCACATTGAAAATGTTGACCGGTATGA
TGAAACCAACTGCAGGAAAGATTTACTTTGATAGAAAACTTTGGGATAGGAAAGATTTGTCAAAAATAGGAGCGTTAATT
GAAAATCCGCCTATTTATGAAAATCTTTCCGCCAGAGAGAATTTGAAGGTAAGACAATTATTGCTTGGTGCAGATGAAAA
CAGAATTGATGAGGTCTTGCAGATTGTATCACTTACAAACACCGGCAAGAAGAAAGCAGGGCAGTTTTCTTTGGGAATGA
AGCAAAGACTAGGCATTGCAATGGCATTGCTTGGAGAACCGGAACTTTTGATATTGGATGAACCTACGAATGGATTAGAT
CCAATAGGCATCGAGGAATTACGAGAGCTGATCCGGTCTTTTCCGGAACAGGGAATCACTGTAATTCTCTCCAGTCATAT
TCTCTCAGAGGTACAGTTACTTGCAGATAAAGTCGGGATTATTTCAGGTGGAATCTTAGGATACGAAGGAGCATTAAAGC
AGGGAGATAATCTTGAAGATTTGTTTATGAATGTGGTAAGAAAAAACCGGAAAGCAGGTGAAATCCATGGTTAA

Protein sequence :
MEMMLQTQNLCKYFRKQKAVNNVSLNIEKDQIYGLLGPNGAGKSTTLKMLTGMMKPTAGKIYFDRKLWDRKDLSKIGALI
ENPPIYENLSARENLKVRQLLLGADENRIDEVLQIVSLTNTGKKKAGQFSLGMKQRLGIAMALLGEPELLILDEPTNGLD
PIGIEELRELIRSFPEQGITVILSSHILSEVQLLADKVGIISGGILGYEGALKQGDNLEDLFMNVVRKNRKAGEIHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 3e-41 52
cdd4 CAA63569.1 - Not tested PaLoc Protein 1e-46 51
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 8e-43 49
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 8e-43 49
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 8e-43 49
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 9e-43 49
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 2e-39 47
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 2e-39 47
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-39 45
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-39 45
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 4e-31 44
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 1e-28 41
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 1e-28 41
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 4e-28 41