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Name : ROI_04900 (ROI_04900) Accession : YP_007830821.1 Strain : Roseburia intestinalis M50/1 Genome accession: NC_021040 Putative virulence/resistance : Virulence Product : Predicted nucleoside-diphosphate sugar epimerases Function : - COG functional category : - COG ID : - EC number : - Position : 487462 - 489330 bp Length : 1869 bp Strand : + Note : - DNA sequence : ATGAAACAGTTAATTCAAGATAGACAGTTATTTATGCGCCGTATTTTTTTGATGTGTTATGACATGCTTGCTGTATTTGT TGCGAGTATGTTTGCGCTGATAATACGGTTTGATCTGAACTTTTACAATGTACCGATAGAATATCTGAATGAAGTATGGA GAACACTTCCGTATATGATGGTGATCACATTGATCATCTTCTGGGCACTCCGGTTATATTCAAGTCTGTGGAGTTACGCA GGGGCACTTGAAATGATGTATGTTGTTTCGGCATGTATACTGGATGCGATTGTGGTAGCTGCATTGATCCTGGTACGTAA CTGGGGAGATATGTTCCCGGTTCCACGAAGCTTTTATATTTTATATGGGTTATTTTTACTTGTGCTGATCATGGGATGCA GATATTCCTATCGTGGACTTAGGGCAATCCGGAATATGCGAAGAGACGGCACATATCGTAGGAATGTACTGGTAATCGGT GCAGGTGAGGCTGGTAATCAGCTGATTAAAGAGATTAACAATAGCCGTTATGTAAAGAAAAAAGTTGTCGGTGTAATTGA TGATGATAAGACGAAGATTGGTAATTATATCCATGGAGCAAAGGTGATCGGTGACAGAAGCTGCATCCGGGATAAGGTGT TGGAACTGCATGTGCATGAGATCATTATAGCGATGCCATCAGCCTCCCCGAAACAGATGAAGGGGATTCTTGATATTTGT AAAGAGACCGGCTGTGAATTAAAACGTCTTCCGGGAATTTACCAGCTTGTTAATGGAGAAGTTGGTATCAGCAAATTAAA AGATGTTGATGTGAATGATCTGCTTGGAAGAGAACCGGTCATGGTGAATCTTGAGTCTATCATGGGTTATGTGTCCGGGA AAGTTATCATGGTAACCGGTGGGGGTGGTTCTATCGGAAGTGAGTTGTGCAGACAGATCGCGGGACACAAACCAAAGCAG CTGATTATTTTAGATATTTATGAGAATACCACATATGATATACAGAATGAATTAAAGGTAAAATTCCCGGATCTTGATCT GGTTGTGCTGATCGGTTCTGTGCGGAATACCAATCGAATGAACTGGATTTTTGAGACCTATCATCCGGAGATCATTTACC ATGCGGCAGCTCATAAACACGTGCCGTTGATGGAGGAGAGCCCGAATGAAGCAATCAAGAACAATGTCCTTGGCACATGG AAAATCGTGCAGGCGGCAGACCGTTATCATGTAAAACGGTTTGTGATGATCTCTACCGATAAGGCGGTCAATCCGACCAA TATCATGGGCGCAAGTAAAAGGATCTGTGAAATGATCATTCAGACTTACAATAAGCGCTCTGAGACGGAATACGTGGCAG TACGTTTTGGAAATGTGCTCGGCAGCAATGGAAGCGTGATCCCGTTATTTAAAAAGCAGATTGAACGCGGCGGTCCTGTA ACGGTGACGGATCCCAATATCGTGCGTTACTTTATGACAATACCGGAGGCAGTATCTCTGGTACTGCAGGCGGGCGCCTA TGCAAAAGGTGGGGAGATTTTCGTCCTTGATATGGGAGAACCGGTCAAAATCCTTGATCTTGCGAGAAACCTGATCCTGT TATCCGGTCATAAACCGGATGAAGATATCCAGATCGTGTTTACCGGACTGCGCCCCGGGGAAAAATTATACGAAGAGATG CTGATGGATGAGGAGGGACTGCAGGATACCGAGAATAACCTGATCCACATCGGAAAACCGATCGAACTGGATGAAGAGAA GTTTTTGGATCAGCTGGAAAAATTAAAAGAGTATGTTGTGACAGAACCTTCTGATATCAGGGAATGGGTAAAAGAAATTG TGCCGACGTATCAGCCGAAGGAGGAGTAG Protein sequence : MKQLIQDRQLFMRRIFLMCYDMLAVFVASMFALIIRFDLNFYNVPIEYLNEVWRTLPYMMVITLIIFWALRLYSSLWSYA GALEMMYVVSACILDAIVVAALILVRNWGDMFPVPRSFYILYGLFLLVLIMGCRYSYRGLRAIRNMRRDGTYRRNVLVIG AGEAGNQLIKEINNSRYVKKKVVGVIDDDKTKIGNYIHGAKVIGDRSCIRDKVLELHVHEIIIAMPSASPKQMKGILDIC KETGCELKRLPGIYQLVNGEVGISKLKDVDVNDLLGREPVMVNLESIMGYVSGKVIMVTGGGGSIGSELCRQIAGHKPKQ LIILDIYENTTYDIQNELKVKFPDLDLVVLIGSVRNTNRMNWIFETYHPEIIYHAAAHKHVPLMEESPNEAIKNNVLGTW KIVQAADRYHVKRFVMISTDKAVNPTNIMGASKRICEMIIQTYNKRSETEYVAVRFGNVLGSNGSVIPLFKKQIERGGPV TVTDPNIVRYFMTIPEAVSLVLQAGAYAKGGEIFVLDMGEPVKILDLARNLILLSGHKPDEDIQIVFTGLRPGEKLYEEM LMDEEGLQDTENNLIHIGKPIELDEEKFLDQLEKLKEYVVTEPSDIREWVKEIVPTYQPKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-89 | 49 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 7e-96 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROI_04900 | YP_007830821.1 | Predicted nucleoside-diphosphate sugar epimerases | VFG1300 | Protein | 1e-93 | 48 |
