Gene Information

Name : ROI_39470 (ROI_39470)
Accession : YP_007833734.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Resistance
Product : ABC-type multidrug transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3963232 - 3963996 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGAACTATATTATTACAACAGAACAGTTGACAAAAAAATACAAATCTTTTGTCGCTGTTAATGATGTTTCACTTCATAT
TCGGAAAGGAAGTATTTACGGCTTTCTTGGTCCGAATGGAGCAGGAAAATCAACCACTATGAAAATGCTCTTAGGACTGA
CTGCTCCCACGAAAGGAGACTTTACAATTGATGGGAAACAATTTCCAGCTGACCGCATTTCCATTTTGAAAGAAATAGGC
TCATTTATTGAGTCACCATCTTTCTATGCAAATCTGACAGGTAAGGAAAACCTCGATATTATCCGTCGCATTTTAGGACT
ACCCCAAAGTGCAGTTGAAGACGCATTGGAATTGGTTGGTCTTTCAGAGTTTGGTGATCGTCTTGCAAAAAAATATTCAC
TTGGCATGAAGCAGCGGTTAGGGCTTGCCGGGGCGTTGATTGGTAGACCGCCTATTTTGATTTTGGATGAGCCAACAAAT
GGACTTGATCCGTCCGGCATACACGAAATCCGAAATTTGATTAAGTCCCTACCTGAACTTTACGATTGTACAGTACTTAT
TTCTTCTCATATACTATCTGAAATCGAGCTGATGGCAGATGACATTGGGATACTCAATCATGGGCGGTTGTTATTTGAGG
GCAGTTTGGATGAACTACGGCAGTATGCCTTACAATCTGGTTTTGCTACTGATAATTTGGAAGATATGTTTCTGTCTATG
ATTGAGAAAGACAATACAAGCAGGAAGCAGAGGGCAAAACTATGA

Protein sequence : 
MNYIITTEQLTKKYKSFVAVNDVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTAPTKGDFTIDGKQFPADRISILKEIG
SFIESPSFYANLTGKENLDIIRRILGLPQSAVEDALELVGLSEFGDRLAKKYSLGMKQRLGLAGALIGRPPILILDEPTN
GLDPSGIHEIRNLIKSLPELYDCTVLISSHILSEIELMADDIGILNHGRLLFEGSLDELRQYALQSGFATDNLEDMFLSM
IEKDNTSRKQRAKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 8e-59 58
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 3e-47 53
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 3e-43 51
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 3e-43 51
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 7e-36 43
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 4e-28 42