Gene Information

Name : ROI_39410 (ROI_39410)
Accession : YP_007833731.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Unknown
Product : Transposase and inactivated derivatives
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3958048 - 3958470 bp
Length : 423 bp
Strand : +
Note : -

DNA sequence :
ATGGATAATCAAAGTATAACACATACACGATGGAACTGCACATATCATATTGTTTTTATTCCAAAGTTTCGAAGAAAAAT
AATGTATGGAGAAACGAAAAAGGATTTAGTGGAAATCATAAAAAAATTGTGTGAGATGAAGCAGGTGCAACTTATTGATG
GAAAGGTGTGTGTAGACCACGTACATATGTATGTGGCTATTCCACCAAAGATGTGTGTTTCTGAATTTATGTCATATCTA
AAAGGAAAAAGTACATTGATGTTGTTTGACAGACATCCTGAGTATCGGACAAAATGGGGAGACAGACATTTTTGGGCAAG
AGGATATTTTGTTTCTACAGTAGGTAATGTGAATGAAGAAACGGTAAGAAAATATATTCAAGAACAAGAAGAAAATGATA
AGTTAGAGGATGGAAGAAAGTAG

Protein sequence :
MDNQSITHTRWNCTYHIVFIPKFRRKIMYGETKKDLVEIIKKLCEMKQVQLIDGKVCVDHVHMYVAIPPKMCVSEFMSYL
KGKSTLMLFDRHPEYRTKWGDRHFWARGYFVSTVGNVNEETVRKYIQEQEENDKLEDGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-36 53
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 4e-33 51
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 9e-35 50
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 5e-31 48
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 4e-31 48