|
Name : ROI_39190 (ROI_39190) Accession : YP_007833710.1 Strain : Roseburia intestinalis M50/1 Genome accession: NC_021040 Putative virulence/resistance : Resistance Product : ABC-type antimicrobial peptide transport system, ATPase component Function : - COG functional category : - COG ID : - EC number : - Position : 3942789 - 3943454 bp Length : 666 bp Strand : + Note : - DNA sequence : ATGAGCATTTTACAAACAATCGACTTAAAGAAGTATTACGGCACAGAACCAAATATTACTCGTGCCCTTAATGGTGTAAA TTTTACTGTGGAACAGGGAGAATTTGTTGCCGTAGTTGGAACTTCCGGCAGCGGTAAGTCTACATTGCTTCACATGATGG GAGGACTTGATACCCCCACTTCCGGCAGCGTGATTGTACGGGGAGAAGAACTCGCAAAAAAGAATGATGATGAATTGACA ATTTTCCGCCGGCGTAACATCGGATTTATCTTCCAAAATTATAATCTGGTTCCGATTTTGAATGTATATGAAAATATCGT CCTGCCTGTGGAACTGGATGGCGATACAGTAGACCAGAAATTTATGGACGAAGTTGTGTATATGTTGGCTTTAGAAGATA AACTGGAAAATATGCCGAACAATCTTTCAGGCGGTCAACAGCAACGTGTAGCGATTGCACGAGCTTTAATTACGAAGCCT GCGATTATCCTTGCTGATGAACCGACCGGAAATCTTGATAGCAAGACCAGTGCAGATGTGTTAGGGCTTTTGAAGCATAC CAGCGGAGAATTTAATCAGACCATTGTAATGATTACTCACAACAACGAGATCGCTCAACTCGCAGACCGCATTGTACGGA TTGAAGATGGTAAAATTGTTGGCTAA Protein sequence : MSILQTIDLKKYYGTEPNITRALNGVNFTVEQGEFVAVVGTSGSGKSTLLHMMGGLDTPTSGSVIVRGEELAKKNDDELT IFRRRNIGFIFQNYNLVPILNVYENIVLPVELDGDTVDQKFMDEVVYMLALEDKLENMPNNLSGGQQQRVAIARALITKP AIILADEPTGNLDSKTSADVLGLLKHTSGEFNQTIVMITHNNEIAQLADRIVRIEDGKIVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 6e-37 | 44 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 7e-38 | 44 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 7e-38 | 44 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 7e-38 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROI_39190 | YP_007833710.1 | ABC-type antimicrobial peptide transport system, ATPase component | CP001581.1.gene598.p | Protein | 1e-84 | 80 |
| ROI_39190 | YP_007833710.1 | ABC-type antimicrobial peptide transport system, ATPase component | CP001581.1.gene798.p | Protein | 3e-58 | 55 |
| ROI_39190 | YP_007833710.1 | ABC-type antimicrobial peptide transport system, ATPase component | NC_012469.1.7686878. | Protein | 4e-36 | 44 |
| ROI_39190 | YP_007833710.1 | ABC-type antimicrobial peptide transport system, ATPase component | NC_012469.1.7685735. | Protein | 3e-36 | 41 |
