Gene Information

Name : ROI_33560 (ROI_33560)
Accession : YP_007833237.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 3351240 - 3351968 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence :

ATGGAAACAATAAATGCGATAGAGGTAAAAGGACTCTGGGCGGCATATGAGGACCGCATGATCATAGAGGAGATGAATTT
AAAAATACCGAAGGGAAACATCACGATCATTATCGGTGCAAATGGCTGTGGAAAATCCACGCTGTTGAAAGTGATTTCAA
GAATTTTGCCTGCAAAGAGGGGTGAAGTCCGGATTGATGGAATGGATATCCGCAAAGAAAAAGCAGAACATATCGCCAAA
AAAGTTGCTGTTCTCCCGCAGACTCCGACCTGTCCGGATGCAATTACCGTGCGTGAGCTGGTTTCCTACGGACGTTTTCC
TTACCGCAAAGCGATTGGAGGCATGAGCCGCCACGACATAGAGCAGGTGGACTGGGCACTTGAAAAAACAGGTCTGACAG
AAATTTCCGGCCGCCTTGTGACAGAATTATCCGGCGGACAGAGACAGCGCGCATGGATCGCCATGACACTTGCGCAGGAG
ACGGAAATGATCTTGCTTGATGAGCCGACGACATATCTGGATATGGCATATCAGCTGGACGTGCTGCAGCTTTTAGAGCG
CATGAACCGGGAAAAACAGCTTACGATCGTGATGGTGCTGCATGACTTAAACGAAGCCTGCCGCTTTGCAGATCACATTA
TTGGACTGAAAAATGGCAAAGTTGTCTGCGAGGGAAAACCGGCGGATGTGATCACGAGGGAAAATATCCGGAAAAATTTA
TGGAATTGA

Protein sequence :

METINAIEVKGLWAAYEDRMIIEEMNLKIPKGNITIIIGANGCGKSTLLKVISRILPAKRGEVRIDGMDIRKEKAEHIAK
KVAVLPQTPTCPDAITVRELVSYGRFPYRKAIGGMSRHDIEQVDWALEKTGLTEISGRLVTELSGGQRQRAWIAMTLAQE
TEMILLDEPTTYLDMAYQLDVLQLLERMNREKQLTIVMVLHDLNEACRFADHIIGLKNGKVVCEGKPADVITRENIRKNL
WN

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	9e-46	49
SPN23F_09560	YP_002510939.1	ferric siderophore ABC transporter ATP-binding protein	Virulence	PPI-1	Protein	4e-57	47
SP_1035	NP_345510.1	iron-compound ABC transporter ATP-binding protein	Not tested	PPI-1	Protein	4e-57	47
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	3e-46	45
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-47	45
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-47	45
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-47	45
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-47	45
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	1e-41	45
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	1e-41	45
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	1e-41	45
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	1e-41	45
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	5e-40	42
CDCE8392_1767	YP_005134301.1	iron complex transport system ATP-binding protein	Virulence	Not named	Protein	8e-34	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ROI_33560	YP_007833237.1	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components	BAC0164	Protein	3e-40	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ROI_33560	YP_007833237.1	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components	VFG0925	Protein	4e-49	47
ROI_33560	YP_007833237.1	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components	VFG1042	Protein	3e-40	42