Gene Information

Name : ROI_21310 (ROI_21310)
Accession : YP_007832191.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Unknown
Product : Glycosidases
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2142325 - 2144007 bp
Length : 1683 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAGAAAATGGTGGCATGACAAGGTAGCATATCAGATCTATCCAAAGAGTTTTCTGGATACAAACGGAGACGGCAT
TGGTGATCTGAGAGGAATTATCTCAAAACTGGATTATTTAAAGGAACTTGGAATTGATATCATCTGGCTCTCTCCAATCT
ACAAATCGCCGTTTGTTGATCAGGGGTATGACATATCTGATTACTATAAAATCGCCGAAGAGTTCGGAACCATGGAAGAG
TTTGATGAGCTGCTTGCCGAGGCGAAAAAGCGCGATATGTATATTGTGATGGATCTCGTGGTAAATCACTGTTCCAGTGA
ACATGAATACTTTAAGGCAGCGCTGGCCGACCCGGACGGGCCATATGCCGATTATTTTTATTTTGTAAAAGGAATAGATG
GAAAAGAGCCGAGCAACTACCGTTCTTATTTTGGCGGAAAAGCGTGGGAGCCGGTGCCGGGATCAGATAAATATTATCTG
CACATGTTTGCAAAAGAACAGCCGGACTGGAACTGGGAGAATAAAGAAGTCCGCGACAAGATCTATAAAATGATCAACTG
GTGGTTAGATAAGGGACTTGGCGGATTCCGCATCGATGCAATCATTAATATCAAGAAAGATACGAGTTTCCCGTCCTATG
AACCCGATGGGGATGATGGTCTGGTATCCTGTGTAAAAATGGTTGAGGAGACGGACGGCGTCGGAGAATTTTTAGAGGAG
ATGAAACATGAGACCTTCGAGAAATATGATGCTTTTACCGTCGGCGAAGTCTTTAATATGAAAGAGGACGAACTGCGGGA
GTTTGTCGGAGATGATGGGCATTTCTCAAGTATGTTTGATTTCTCCGCGCTTGAGCTGACTTACGGGGAACATGGCTGGT
ATGACAGCAAACCGGTGGATTTTAAGCGGTGGAGAGAGGTTCTGTTTGCATCCCAGAAGGAGATGGAGGGGATTGGATTC
AAGGCAAATATCATTGAAAATCATGATGAGCCGAGAGGTGCAAGCCGTTATCTTCCGGAATATGCGCAGAATGAAATGGG
CAAAAAAATGCTTGCTACGACTTCGATTCTGCTGCGTGGAATTCCGTTTATCTATCAGGGACAGGAAATCGGCATGACAA
ACTGTCATAGAAATGATATTTCAGAATATGATGATATCAGTACAAAAGATCAGTATCAGGTTGCAATCGACGCGGGCTGC
ACAAAAGAAGAAGCGTTGGCATGCTGCTATGAAAACAGCAGGGATAATGCGCGCACACCGATGCAGTGGAGTGCAGATGA
AAATGGAGGTTTTAGCACACATGCTCCGTGGCTTGCAGTGAATCCGAATTATAAAGAGATCAATGTCAGTGAGCAGGAGG
GAAGGGCGGACTCTGTACTTTCCTATTATAAAGAACTGATTACACTGCGCAAATCACCGGAATACGAAGAAACATTTGTC
TATGGAAATGTAGAGCCGGTTTACGAAGATACGGATACAGTGTTTGGATTTATGCGTATGGGTAAAGAAAACAGACAGAA
AATACTCGTGGCAGCAAATTACGGAAAAGAGGCAGTAAGTCTGCCACTGCCTGGAACTGCCAAAAAACTTTTGCTGTCAA
ATGCCGGAAGGAGAAAACTGGCAGATGCAGATCATATTACATTAGAGAGCCTTGAAACAGCAGTCGTTCTGCTGAAGGCA
TAA

Protein sequence :
MKRKWWHDKVAYQIYPKSFLDTNGDGIGDLRGIISKLDYLKELGIDIIWLSPIYKSPFVDQGYDISDYYKIAEEFGTMEE
FDELLAEAKKRDMYIVMDLVVNHCSSEHEYFKAALADPDGPYADYFYFVKGIDGKEPSNYRSYFGGKAWEPVPGSDKYYL
HMFAKEQPDWNWENKEVRDKIYKMINWWLDKGLGGFRIDAIINIKKDTSFPSYEPDGDDGLVSCVKMVEETDGVGEFLEE
MKHETFEKYDAFTVGEVFNMKEDELREFVGDDGHFSSMFDFSALELTYGEHGWYDSKPVDFKRWREVLFASQKEMEGIGF
KANIIENHDEPRGASRYLPEYAQNEMGKKMLATTSILLRGIPFIYQGQEIGMTNCHRNDISEYDDISTKDQYQVAIDAGC
TKEEALACCYENSRDNARTPMQWSADENGGFSTHAPWLAVNPNYKEINVSEQEGRADSVLSYYKELITLRKSPEYEETFV
YGNVEPVYEDTDTVFGFMRMGKENRQKILVAANYGKEAVSLPLPGTAKKLLLSNAGRRKLADADHITLESLETAVVLLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 5e-101 42