Gene Information

Name : ROI_21100 (ROI_21100)
Accession : YP_007832173.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2123705 - 2123974 bp
Length : 270 bp
Strand : +
Note : -

DNA sequence : 
ATGACAGAAGGACAGGTACTTGATGTAGCAAAAGAAGCAATTTATACGATTATAATCTGTTCGGCTCCAATGTTGATCAT
TTCACTGGTTGTTGGTTTGATTGTCAGTATTTTCCAGACGGTTACATCTATTCAGGAGCAGACGCTGACGTTTGTTCCTA
AAATTATTGCAGTATTTGTCGGACTTATGATTTTTGGATCATGGATTTTGACAAATCTGACAGAATTCGTGACGACATTA
TGGTCGAATTTTAGTATGTATCTCGGTTAG

Protein sequence : 
MTEGQVLDVAKEAIYTIIICSAPMLIISLVVGLIVSIFQTVTSIQEQTLTFVPKIIAVFVGLMIFGSWILTNLTEFVTTL
WSNFSMYLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 0.003 41
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 0.011 41
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 0.011 41
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 0.011 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROI_21100 YP_007832173.1 flagellar biosynthetic protein FliQ VFG2132 Protein 2e-04 44
ROI_21100 YP_007832173.1 flagellar biosynthetic protein FliQ VFG2495 Protein 7e-06 41