Gene Information

Name : ROI_01460 (ROI_01460)
Accession : YP_007830530.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 143991 - 144821 bp
Length : 831 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTGAATTTCGCAATGTTTCCGTTTCCTGTCAGCACACGCCGATCTTATACGACATCTCATTAACTTTCCGTGGCGG
GGAGATCACCACGATCCTTGGCCCGAACGGCTGCGGCAAGACTACCCTGGTCCAGTGCTTAAACGGTGCTTCCACGGTGA
CCGCCGGACAGATATTCTTAAACGGACAGGATTTTCTTAAAATTTCCCCGAAAGAACGTGCCCGGGAAATTTCCCTGCTC
CCACAGGTCCGCACGATCATTCCTGCTATTCCGGTTAAAATGCTTGTGGAACACGGGCGCTTTCCTTACCTTGGATTTTC
CCGCCGGAAATCAAAGGAGGACACTGAAATTGTAAACCGTGCCATGGAATTTACCCACATCAGCCAGTATGCCGACCAGT
ATGTCGACACGCTCTCCGGCGGTATCAGACAGCGCGTGTTTTTTGCCATGGTGTTAGCGCAGGATTGTGATTACATCGTG
TTGGACGAGCCGACCACCTATCTCGACCTGACCGGGCAGCGCGAATTTTACGCCATGATAAAGGAATTAAAAAAACAGGG
AAAAACGATTATTCTGATCTTACATGATCTGAGTCAGGCGGTGCGCATCTCAGATACGCTAGTTGTCATGAACCGCGCCG
GTTCCAGATCTCTTGATGAAGCAGCGCATGCCGGTACAGACTCTGATGTTAAAGCAACTGATTTTCCCGGCAGCATCGCC
ATGGTTGGCACGCCCCAGGAGTGTCTGCAGTCGCATGTGATCGAGGATGTGTTTCAGACAAGCTGGAAAAGGTTTACGGA
TGAAGATGGGGAGTATTACTTTTTTGAGTAA

Protein sequence : 
MLEFRNVSVSCQHTPILYDISLTFRGGEITTILGPNGCGKTTLVQCLNGASTVTAGQIFLNGQDFLKISPKERAREISLL
PQVRTIIPAIPVKMLVEHGRFPYLGFSRRKSKEDTEIVNRAMEFTHISQYADQYVDTLSGGIRQRVFFAMVLAQDCDYIV
LDEPTTYLDLTGQREFYAMIKELKKQGKTIILILHDLSQAVRISDTLVVMNRAGSRSLDEAAHAGTDSDVKATDFPGSIA
MVGTPQECLQSHVIEDVFQTSWKRFTDEDGEYYFFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-36 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROI_01460 YP_007830530.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components BAC0164 Protein 9e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROI_01460 YP_007830530.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components VFG1042 Protein 9e-37 45
ROI_01460 YP_007830530.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components VFG0925 Protein 7e-34 43