Gene Information

Name : ROI_13590 (ROI_13590)
Accession : YP_007831551.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1363201 - 1363725 bp
Length : 525 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAGAAGAAGAAAGAAAATTTTTGGAAATTGTTGATCTGAAAAAAGGGTTTGGAAGCGGGGAGACCCGACAGGAAGT
ACTTCGGGGAATGAATTTTTCCGTGGCAAAAGGAGAATTTTGTGTGCTGCTTGGACCATCCGGTTCCGGAAAGTCGACGC
TTCTCAATATCATTGGTGGTATCGACAGTGCGGACTCCGGTTACATCTCCATCAACGGCGATAAGTTAGAAGAACTCGGA
GAGAAGAAGCTGACACAGTACCGCAGAAAACATTTAGGTTATGTATTTCAGATGTATAACCTGATCGCAAATTTAAATGT
CAAGGAAAATATTGAGGTTGGTGCATATTTATCAGACAGTCCGCTCGATATTGACGATTTATTACATACGCTGGGACTTT
ATGAACACAGGCATAAACTGCCGAACCAGCTTTCCGGCGGACAGCAGCAGAGGGTTTCCATCGGGCGTGCCATTGTGAAA
AATCCGGATATCCTGCTCTGTGATGAGCCGACGGGTACTATATAA

Protein sequence : 
MSEEERKFLEIVDLKKGFGSGETRQEVLRGMNFSVAKGEFCVLLGPSGSGKSTLLNIIGGIDSADSGYISINGDKLEELG
EKKLTQYRRKHLGYVFQMYNLIANLNVKENIEVGAYLSDSPLDIDDLLHTLGLYEHRHKLPNQLSGGQQQRVSIGRAIVK
NPDILLCDEPTGTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROI_13590 YP_007831551.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 7e-32 46
ROI_13590 YP_007831551.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 4e-27 42