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Name : RUM_11300 (RUM_11300) Accession : YP_007829286.1 Strain : Ruminococcus champanellensis 18P13 Genome accession: NC_021039 Putative virulence/resistance : Unknown Product : D-xylose isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.5 Position : 1237663 - 1238988 bp Length : 1326 bp Strand : + Note : - DNA sequence : ATGAGCGAATTTTTTACAGGCATTTCAAAGATCCCCTTTGAGGGAAAGGCATCCAACAATCCCATGGCGTTCAAGTACTA CAACCCGGATGAGGTCGTAGGCGGCAAGACCATGCGGGAGCAGCTGAAGTTTGCGCTGTCCTGGTGGCATACTATGGGGG GAGACGGTACGGACATGTTTGGTGTGGGTACCACCAACAAGAAGTTCGGCGGAACCGATCCCATGGACATTGCTAAGAGA AAGGTAAACGCTGCGTTTGAGCTGATGGACAAGCTGTCCATCGATTATTTCTGTTTCCACGACCGGGATCTGGCGCCGGA GGCTGATAATCTGAAGGAAACCAACCAGCGTCTGGATGAAATCACCGAGTATATTGCACAGATGATGCAGCTGAACCCGG ACAAGAAGGTTCTGTGGGGTACTGCAAATTGCTTCGGCAATCCCCGGTATATGCATGGTGCCGGCACTGCGCCCAATGCG GACGTGTTTGCATTTGCAGCTGCGCAGATCAAAAAGGCAATTGAGATCACCGTAAAGCTGGGTGGCAAGGGCTATGTATT CTGGGGCGGCAGAGAGGGCTACGAAACGCTGCTGAACACCAATATGGGTCTGGAACTGGATAATATGGCACGGCTGCTGC ATATGGCAGTGGACTATGCAAGAAGCATCGGCTTTACCGGCGACTTCTACATCGAGCCCAAGCCCAAGGAGCCTACCAAG CATCAGTATGATTTTGATACCGCAACCGTGATCGGCTTCCTGCGCAAGTATAATCTGGACAAGGACTTCAAGATGAACAT CGAAGCCAACCACGCAACCCTTGCACAGCACACCTTCCAGCATGAACTGCGGGTAGCACGGGAGAACGGCTTCTTTGGCT CCATCGATGCTAACCAGGGTGACACCCTGCTGGGCTGGGATACGGATCAGTTCCCCACTAATACCTATGACGCAGCACTG TGTATGTACGAGGTACTCAAGGCTGGCGGTTTTACCAATGGCGGTCTGAACTTTGACTCCAAGGCACGGCGTGGATCCTT TGAGATGGAGGATATCTTCCACAGCTACATTGCCGGTATGGACACCTTTGCACTGGGTCTGAAGATTGCGCAGAAGATGA TCGATGACGGACGGATCGACCAGTTCGTGGCTGATCGGTATGCAAGCTGGAACACCGGCATCGGTGCGGATATCATTTCC GGCAAGGCAACCATGGCAGATTTGGAGGCTTACGCACTGAGCAAGGGCGATGTGACCGCATCCCTCAAGAGCGGTCGTCA GGAATTGCTGGAAAGCATCCTGAACAATATTATGTTCAATCTTTAA Protein sequence : MSEFFTGISKIPFEGKASNNPMAFKYYNPDEVVGGKTMREQLKFALSWWHTMGGDGTDMFGVGTTNKKFGGTDPMDIAKR KVNAAFELMDKLSIDYFCFHDRDLAPEADNLKETNQRLDEITEYIAQMMQLNPDKKVLWGTANCFGNPRYMHGAGTAPNA DVFAFAAAQIKKAIEITVKLGGKGYVFWGGREGYETLLNTNMGLELDNMARLLHMAVDYARSIGFTGDFYIEPKPKEPTK HQYDFDTATVIGFLRKYNLDKDFKMNIEANHATLAQHTFQHELRVARENGFFGSIDANQGDTLLGWDTDQFPTNTYDAAL CMYEVLKAGGFTNGGLNFDSKARRGSFEMEDIFHSYIAGMDTFALGLKIAQKMIDDGRIDQFVADRYASWNTGIGADIIS GKATMADLEAYALSKGDVTASLKSGRQELLESILNNIMFNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 4e-112 | 55 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 3e-112 | 55 |
