Gene Information

Name : RUM_09620 (RUM_09620)
Accession : YP_007829140.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 1049884 - 1051068 bp
Length : 1185 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATAGCAGTAGCAGGCACCGGCTATGTCGGCCTTTCCATGGCGATACTTTTGGCACAACACAATACTGTCAAGGC
TGTCGATATCATTCCCGAAAAGGTGGAGATGATAAACAATAAGAAGTCACCTATTGTCGATAAGGAAATTGAGGAGTACC
TGGAAAATAAGGACCTGGACCTTGAAGCAACTACAGACGGTGACAGCGCCTACCGTGATGCAGACCTTGTGGTCATTTCA
ACGCCTACAAACTATGATCCCTCCAAAAACTATTTCGATACAAGCTCGGTCGAGAGCGTGATAAAACAGGTTATAAACGT
CAATCCCGATGCGGTCATGATCGTGAAATCCACTGTTCCCGTTGGCTTTACCGAGGGGGCAAGGGAAGAATATTGCTGCG
ACAACATTCTGTTCAGTCCCGAATTTTTACGGGAGGGACGTGCACTGTACGATAACCTTTATCCCAGCCGTATCATTGTC
GGCGTTCCGGTCAAGAATGCAAGGCTGCACAAGGCCGCTGAGACCTTTGCCAATTGTCTGAAGGAGGGTGCGATCAAGGA
AAACATCGAAGTGCGCTTCATGAACCCGACTGAGGCAGAGGCAGTCAAGCTCTTTGCCAACACATATCTTGCGTTACGGG
TTTCGTATTTTAACGAACTCGATACCTATGCCCAGGTCAGAGGACTTGATACCAAATCCATCATTGAGGGCGTCTGCCTT
GATCCGCGCATCGGGAATCACTACAACAACCCGTCTTTCGGATACGGCGGTTATTGTCTGCCAAAGGACACCAAGCAGTT
GCTTGCCAACTACAACCATGTACCGCAGAATATTATTTCAGCCATTGTTGCAGCGAATGGCACTCGAAAGGATTTCATTG
CCGATCAGATTATTGCAAAGAATCCCAGGATTGTTGGTGTATACCGTCTTACCATGAAAGCCGGCAGCGATAACTTTCGC
CAGTCCTCTATTCAGGGCGTTATGAAACGCATCAAAGCAAAAGGCATAGAGGTCGTCATCTACGAGCCGACCATGAAAGA
GGACAGCTTCTTCAACAGCCGGGTTATCCGCAATCTTGACGAATTCAAAGAGATAAGCGATGTCATTCTTGCCAACCGAT
ATAACGAAGATATTGCCGATGTACTTGACAAGGTCTATACAAGGGATTTGTATTTCAGAGATTAA

Protein sequence : 
MKIAVAGTGYVGLSMAILLAQHNTVKAVDIIPEKVEMINNKKSPIVDKEIEEYLENKDLDLEATTDGDSAYRDADLVVIS
TPTNYDPSKNYFDTSSVESVIKQVINVNPDAVMIVKSTVPVGFTEGAREEYCCDNILFSPEFLREGRALYDNLYPSRIIV
GVPVKNARLHKAAETFANCLKEGAIKENIEVRFMNPTEAEAVKLFANTYLALRVSYFNELDTYAQVRGLDTKSIIEGVCL
DPRIGNHYNNPSFGYGGYCLPKDTKQLLANYNHVPQNIISAIVAANGTRKDFIADQIIAKNPRIVGVYRLTMKAGSDNFR
QSSIQGVMKRIKAKGIEVVIYEPTMKEDSFFNSRVIRNLDEFKEISDVILANRYNEDIADVLDKVYTRDLYFRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-90 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RUM_09620 YP_007829140.1 nucleotide sugar dehydrogenase VFG0963 Protein 2e-103 56